KEGG   Stereum hirsutum: STEHIDRAFT_61236
Entry
STEHIDRAFT_61236  CDS       T03127                                 
Name
(RefSeq) beta and beta-prime subunits of DNA dependent RNA-polymerase
  KO
K03021  DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6]
Organism
shs  Stereum hirsutum
Pathway
shs03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:shs00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    STEHIDRAFT_61236
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:shs03021]
    STEHIDRAFT_61236
Enzymes [BR:shs01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     STEHIDRAFT_61236
Transcription machinery [BR:shs03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Core subunits
     STEHIDRAFT_61236
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_2 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_5
Other DBs
NCBI-GeneID: 18805856
NCBI-ProteinID: XP_007306292
JGI: Stehi1_61236
Position
Unknown
AA seq 1141 aa
MEEDAEESQWDQLNRTEWRGLGLTDPIKSIEDKWLLLPAFLKVKGLVKQHIDSFNYFVDV
DIKNILKANNKVTSDVDPRFWLKYTDIRVGFPDRTDADAIDKSVTPNECRLRDTTYSAPI
VVTIQYTRGKNVVRRPNVNIGRLPIMLRSNKCVLTGRSEAQLARMIECPLDPGGYFVVKG
TEKVILVQEQLSKNRIIVETDPVKGVVQASCTSSTHGGLKSKTYVATKKGKIYLRHNSIH
EDVPIVIALKALGIQSDKEILLLTAGNSEAYKDSFAPNLEDAARLGIFTRHQALEWIGSR
VKINRRIVGVRRPAWEEALEALATIVLAHVPVVGMDFRSKAIFVATMTRRVLMAVKDEKM
VDDRDYVGNKRLELAGQLLALLFEDLFKTFNTNLKSSIDKVLKKPSRTTEFDAFNTMQFQ
GDHITSGFVRAISTGNWSLKRFRMDRAGVTHVLSRLSFISALGMMTRISSQFEKTRKVSG
PRALQPSQWGMLCPSDTPEGEACGLVKNLALMTHITTDVDEEPIIKVAYMLGVENIGQST
GTEIYGPNTFVVNVNGTIIGLTRFPTRFVHNFRRLRRAGRVSEFVSVYINHHHHTVNIAS
DGGRICRPMIIVDNGRPMVTSEHVSLLKKAKLEFDDFLRQGLVEYLDVNEENDSYIALYE
PDIVPTTTHLEIEPFTLLGAVAGLIPYPHHNQSPRNTYQCAMGKQAIGAIGYNQLNRIDT
LLYLSVYPQQPMVKTKTIELVGYDKLPAGQNATVAVMSYSGYDIEDALILNKASVDRGYG
RCQVLRKNATLIRKYPNGTFDRLADAPTDEEGNVQKKYDIVQLDGLAGVGERVDPGDVYV
NKQTPTNANDNTFTGQAASVPYKNAPMTYKSPVAGHVDKIMISDTENDQTLIKVLIRQTR
RPELGDKFSSRHGQKGVCGLIVNQEDMPFNDQGIVPDTIMNPHGFPSRMTVGKMIELLAG
KAGVLAGKLQYGTAFGGSKVEDMSRILIENGFSYAGKDMLTSGITGEPMEAYVYFGPIYY
QVKHMVMDKMHARARGPRATLTRQPTEGRSREGGLRLGEMERDCLIGYGATQLLLERLMI
SSDKFEVNACQECGLLGYNGWCTYCKSSKKMAQLTIPYAAKLLFQELMAMNVVPRLVLDD
A
NT seq 3426 nt   +upstreamnt  +downstreamnt
atggaggaggatgcggaagagtcccagtgggaccagctcaatcgcacagagtggcgagga
ttgggacttaccgatccaataaagagcatcgaggacaaatggctactcttgcctgctttt
ctcaaggtgaaaggcttggtcaagcagcatattgactcgttcaactatttcgtcgacgtc
gacatcaagaacattctaaaggcaaacaacaaggtcacctctgatgtcgaccctcgcttt
tggctaaaatacacggatattcgcgttgggtttcccgaccgtacggacgcggacgcgata
gacaagagtgttaccccgaacgaatgccgtctccgcgacactacatatagcgcacccatc
gtcgtcacaatccaatacactcgcggaaaaaacgtcgttcgcaggcccaatgtcaacatc
ggcagactacccatcatgttgcgaagcaacaagtgcgttctcaccggccgctcggaagcg
cagcttgctcgtatgattgagtgcccactggaccctggaggatacttcgtggtcaagggg
acggaaaaggtcattttggtccaggagcagttgagcaagaatcgtatcatcgtcgagacg
gaccctgtgaaaggtgtcgtccaggcttcttgtacttcgtccacacatggaggtctcaag
tcaaaaacctacgtcgcaactaagaagggaaagatctatctccggcacaactcaattcac
gaagacgttcccatcgtcattgccctcaaagccctcggcattcaatctgacaaggaaatc
ctccttctcaccgccggtaactcggaagcgtacaaggattcgttcgccccaaacctcgag
gacgccgccagattggggatcttcacaagacaccaggccttggaatggataggaagtcga
gtcaagatcaatcgacggatcgttggtgtgcgaaggccagcgtgggaggaggctcttgag
gcactggctaccatcgtcttggctcatgtgcccgtcgttgggatggacttccgttcgaag
gccatctttgtggcgactatgactcgacgagtcctgatggccgtgaaagacgagaagatg
gtggacgatagggactatgttggaaacaaacgattggaattggcaggacagttattggcg
ttgttatttgaagacctcttcaagacattcaacacgaacctcaaatcctcaatcgacaag
gtgctcaagaaaccgtcgcggacgacggagttcgacgccttcaacaccatgcagttccag
ggcgatcacatcacttccggtttcgttcgcgccatctcgacgggcaactggtctttgaag
cgtttccgcatggaccgtgctggggtcacgcatgtcctctcgcgtctcagctttatttcc
gccctaggcatgatgactcgtatatcatctcaattcgagaagacacggaaagtcagtgga
ccccgtgctctgcagccgagtcaatggggtatgctttgcccgagtgataccccggaagga
gaggcttgcggtctggtcaagaacttggcgctcatgacccatatcacgaccgacgtcgac
gaagagcccattatcaaggttgcgtacatgctcggggtcgagaacatcggccagtccacc
gggacggagatctatggtccgaacacctttgtagtcaacgtaaacgggacaatcataggt
cttacccgctttccgactcgatttgtccacaacttccgtcgtcttaggcgcgctgggcgg
gtcagtgagtttgtgagcgtttatatcaatcaccaccaccacacagtgaatatcgccagc
gatggcggtcgaatttgtagacccatgatcatcgtcgataacggacgtcccatggtcact
tcggaacatgtctcgctcttgaagaaggcaaaacttgagtttgatgacttcttgcggcaa
ggtctcgttgaatatctggatgtgaacgaggagaacgactcgtacatcgctctctacgaa
ccggatatcgtcccgacgaccacacatctcgagatcgaacccttcactcttctcggtgcc
gtcgctggtctcatcccttacccacatcacaatcaatcgcctaggaatacctaccaatgt
gctatgggtaaacaagccatcggggcaatcggctacaatcagctgaaccgaatcgacacg
ttactctatctatcggtctacccgcagcagcccatggtgaagacgaagacgatcgagctt
gttggatacgacaagcttcctgcgggacagaatgccaccgtcgccgtgatgagttactct
ggatacgatatcgaagatgcgttgattttgaacaaggccagcgtggacagaggttatggc
cggtgtcaagtgcttcgcaagaacgcaactctcatccgaaaatatcccaacggaacattt
gaccggttggcagatgcgcccacggacgaagaaggcaatgtacagaagaaatacgatatc
gtccaactggacggtctcgctggcgtcggcgaacgtgtcgaccccggagatgtctatgtc
aacaagcagacacctacgaacgcaaacgacaacacgttcacagggcaggcggcctcagta
ccgtacaagaatgcgcccatgacctacaagtcacctgtcgcaggccatgttgacaagatc
atgatctctgatacggagaatgaccagacgctcatcaaagttctgatacggcagacgaga
aggcccgaactcggagacaagttttcatctaggcatggtcaaaagggcgtttgtgggctc
atagtgaaccaagaagacatgccattcaatgatcaaggcatcgttcctgataccatcatg
aaccctcatggtttcccttcacgcatgacggtaggaaaaatgattgagctccttgcaggg
aaggccggcgttcttgcaggcaagcttcagtatggtacagcctttggcggctcgaaggtg
gaagacatgtcgcgtattctgattgagaacggcttcagttatgctgggaaggacatgctt
actagtggcatcactggcgaacccatggaggcttacgtctatttcggaccaatatattac
caggtaaagcatatggtcatggacaagatgcatgctcgagccagaggtccgcgcgccaca
ttaacacgccagcccaccgaaggtcgatctcgcgaaggtggcttacgactaggcgagatg
gagcgagattgcttgataggttatggcgcgacgcaactgctccttgaacgactcatgatc
tcttccgacaagttcgaggtcaatgcgtgccaagagtgtggtttgctcggctacaatggc
tggtgcacgtactgcaagagctctaagaaaatggcccagctcacgatcccttatgccgcc
aagctcctctttcaggagctcatggccatgaacgttgtaccacggctggttctagatgac
gcgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (29)   

Download RDF
DBGET integrated database retrieval system