KEGG   Stereum hirsutum: STEHIDRAFT_76208
Entry
STEHIDRAFT_76208  CDS       T03127                                 
Name
(RefSeq) cohesin complex subunit psm1
  KO
K06636  structural maintenance of chromosome 1
Organism
shs  Stereum hirsutum
Pathway
shs04111  Cell cycle - yeast
shs04113  Meiosis - yeast
Brite
KEGG Orthology (KO) [BR:shs00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04111 Cell cycle - yeast
    STEHIDRAFT_76208
   04113 Meiosis - yeast
    STEHIDRAFT_76208
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:shs03036]
    STEHIDRAFT_76208
Chromosome and associated proteins [BR:shs03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Cohesin complex
    STEHIDRAFT_76208
  Meiosis-specific proteins
   Cohesin complex and associated proteins
    STEHIDRAFT_76208
SSDB
Motif
Pfam: SMC_N SMC_hinge AAA_21 AAA_23 AAA_29 THOC7 TolA_bind_tri SbcC_Walker_B FliJ NPV_P10 ABC_tran ATG16
Other DBs
NCBI-GeneID: 18806931
NCBI-ProteinID: XP_007301625
JGI: Stehi1_76208
Position
Unknown
AA seq 1249 aa
MPLIRIEVCDFKSYRGHQVIGPFRNFSSVIGPNGAGKSNLMDAISFVLGVKSAQLRSSQL
KDLVYRGRKLARDSNGDASASGDVSLDVEQGQGEEEGEGTAKRAWVLAVYEDEKGKEWRF
QRTISTIGASEYKLNDRVVTYSVYNTSLTSHNILVKAKNFLVFQGDVEAVASQSPKDLSR
LIEQISGSLELAREYEEAKAEQEKATENATFNFTKRRGIAGEIKQYKEQKTEADKFEALC
QERDDLILRRVLFKLFHIEEALERNAREIKDQARTLEGLREEQRVHDEELADARAEQAKA
RSNAMRKERALKAAERAVEGKKPDLVTTEGQIAHSTRKIRNAETTLAQIARDKEARELVV
KNHKRDLKDVQKAADEAQEEQRRLSSDNMSLSQESLEEYRRLKAQASVLAVEERQSLEIL
LRDEKTAARTFAQLNDKQEELERKKAKLQEELGVQGGSKGELEVKVGSLQGELDKVKQEL
DNQQAERTRIARLETEISEKLQDVHNKLLQANVDQRESERDAKMKETLATLQRIFPGVRG
RLVDLCKPTQRKYETAISVVLGRNIDAVVVDEEKTAIDCIEYMRNQRAGQATFIPLDTIQ
VKPINDKYRAFAKGARLAVDVIQFDAAVERAMHHACGNALVCDTIEVAKYVCWERGQEVK
AVSLEGTIIHKSGLITGGRSSHDGSKKWDEKDLQGLHRVRDSLHSQLSELLKSKPRNKAD
ESLLSEITRLESELVVARDDLAACKLRVTGLKDELKHVDRSIKQNTPELNKARKALDSLR
GKVQELESVVNVEEDAIFEDFCSRIGVANIREYEQRQLRLAQEEGEARLRYDTQIARLMT
QLKFEEDQLATINSRIANYEATVTTETANIERLNALKAQVEEEIATMEEEIEGLKEELKE
LNAELEEKTKDMEKVKKTSMKAGKALDQMLKEITTKNDDIEKLGLERSALYRKCRLDEIK
LPLLEGSLRNVPMEENLREEVAMDVDEEEGATVRPKQINNYGVEVDFEVLDDDDREDPSG
DSLADYDSSIAKLNQDIERMAPNLKAIERLDDVESKLKDTEREAERARKESKDARDHFTD
VKRRRTELFNKAYNHISERIDQVYKDLTKGKASPMGGVAYLSLEDNEEPYASGIKYHAMP
PMKRFRDMEQLSGGEKTVAALALLFAIHSYQPSPFFVLDEVDAALDNTNVAKVARYIRSQ
ASDAFQFIVISLKGSLYEHGDSLVGIYRDQEVNSSRTLTLDLTQYDGQT
NT seq 3750 nt   +upstreamnt  +downstreamnt
atgccgctcatacgcatcgaagtatgcgacttcaaatcataccgcggccaccaggtcata
ggccctttccgtaacttcagctccgtcatcggtcccaacggagccggaaagtccaacctc
atggacgccatctctttcgtcctcggcgtcaagagcgcgcagctccggtctagtcagctc
aaagaccttgtctatcgaggaaggaaactcgcgagggactcgaatggagatgcgagcgcg
agtggcgacgtgagcttggatgtggaacaggggcaaggggaggaagagggtgaagggacg
gcgaagagggcttgggtgctggccgtttatgaggacgagaaggggaaggagtggaggttt
cagaggacaatatctacgatcggcgcctcagaatacaaactcaatgaccgcgtagtaacc
tactccgtctacaacacctccctaacctcccacaacatcctcgtcaaagccaaaaacttc
ctcgtcttccaaggcgacgtcgaagcagtcgcctcgcagtctccaaaagacctctctcga
ctgatagagcagatcagcgggagcttggaactggcgcgggagtacgaggaggcgaaggcg
gagcaggagaaggcgacggagaatgcgacgtttaattttacgaaacgcagagggatcgcg
ggcgagattaagcagtataaggagcagaagacggaggcggataagtttgaggcgttatgt
caggagagggacgacctcatcctccgtcgcgttctcttcaagctcttccacatcgaagaa
gccctagagcgtaacgcccgcgagatcaaagaccaagcacgtaccctcgaaggtctacgc
gaagaacaacgcgtgcacgatgaggaattggcggatgcgagggcggaacaggcgaaggcg
aggtccaacgcgatgcggaaggagagggcactgaaggccgctgagagggctgttgaaggg
aagaaaccagacctggtaactacagaaggccaaatcgcacattccacccgtaaaatccgc
aacgcagaaacgactctcgcacaaatcgcgagagataaagaggccagggagctcgtggta
aagaaccataagcgggatttgaaggacgtgcagaaggctgcggatgaggcgcaggaggaa
caaaggaggctgtcgagtgataatatgtcgcttagccaggaatcattggaggagtatcgt
agactgaaagcccaagcctccgtcctcgccgtcgaggaacgtcagtccctcgagatcctc
ctaagagatgagaagacggctgcgaggacgttcgcgcagttgaacgataaacaagaggag
ctggagaggaagaaggcgaagctgcaggaggagctgggcgtgcagggagggagtaagggt
gagctggaggtaaaagtcgggtcgttacagggtgagttggataaagtgaagcaagagctt
gataaccaacaggcggagagaacgaggatcgcgcgactcgaaaccgagattagcgagaag
ctgcaggacgtgcataacaagcttttgcaagcgaatgtggaccagcgcgagtcggaaaga
gatgcaaagatgaaggagacgttggcgacgttgcagaggatcttccctggtgtgcggggc
cgactggttgacctgtgcaagccgacgcagcggaaatacgagaccgcgatctctgttgtt
cttggacggaatattgatgccgttgtcgtggatgaggagaagacggctattgactgcatt
gagtacatgcgtaaccaacgtgccggccaagcgaccttcatccccctcgacacgatccaa
gtcaaacccatcaacgacaagtaccgcgccttcgcgaaaggtgcacgtctcgcggtggat
gtgattcagttcgacgcggcagtagaaagggcgatgcatcatgcgtgtggaaacgcgttg
gtttgcgacacgattgaggtggcgaagtatgtgtgctgggagaggggtcaggaggtcaaa
gccgtgtctttggaggggacgatcattcataagagcggtcttatcactggtggacgaagt
tcgcatgacgggagcaagaagtgggacgagaaggatttgcagggcctgcaccgcgttcga
gactcgctccacagccagctcagtgagctgctcaagtctaagccaaggaacaaggcagac
gagagtctactctctgagatcacgaggctcgagtccgagcttgtcgttgcgagagatgat
ctggcggcttgcaagttgcgtgtgactggtctgaaagacgagttgaaacacgtcgatcgc
agtatcaaacaaaacacgcctgagttgaacaaggcccgcaaagccctcgactcccttcgg
ggcaaagttcaagaactcgaatcagtggtcaacgtcgaggaggatgccatcttcgaggac
ttctgttccagaatcggggtcgccaatattcgagagtatgagcagaggcagctgaggctt
gcgcaggaagagggcgaggcaaggttgagatatgatacgcagatcgcgaggttgatgacg
cagttgaagttcgaagaagatcaacttgcgaccatcaacagccgaatcgcgaactacgaa
gccactgtaacgaccgagacggccaacatcgaacggttgaacgcgctcaaggcccaggta
gaagaggagatagcgactatggaggaggagatcgagggcttgaaggaggagttgaaggag
ttgaatgcggagttagaggagaagacgaaggacatggagaaggtgaagaagacgagcatg
aaagcagggaaggcgctcgatcagatgctcaaggagatcacaaccaagaatgatgatatc
gagaagttgggtcttgagcggtcggcactgtatcgcaagtgtcgactggatgagattaag
ctgcctttgctcgaaggttcactacggaatgtgcctatggaagagaatcttcgcgaagag
gtggccatggatgtcgatgaagaggaaggcgcgaccgtgcgaccgaagcagatcaataac
tatggagtcgaagtagacttcgaagtgttggacgacgatgaccgtgaagatcctagcggc
gatagtctggctgattacgactcgagtatcgccaagctgaatcaggacatcgagcgcatg
gcaccgaatctaaaggctatcgaacgacttgacgacgttgagtcgaagctcaaggacacc
gagcgagaagccgagagggctcgaaaagagtccaaggatgccagggaccatttcaccgat
gtcaagcgtcgacgaaccgaactcttcaacaaagcgtacaaccacatctccgagcgtatc
gaccaggtttacaaggacctaacgaagggcaaagcttctcccatgggaggtgtggcgtac
ctcagtttggaagataacgaggaaccatatgctagcggcatcaaataccacgccatgccg
cccatgaagcggttccgcgacatggagcagctctccggtggcgagaaaaccgtcgccgcg
ctcgctcttctcttcgccatccacagctaccagcccagtcctttcttcgtgctggatgag
gtcgatgccgcacttgataatacgaacgtcgccaaggttgcgagatatatccggtcgcag
gcctcggacgcgttccagttcattgtgatcagtttgaagggctcgttgtacgagcacgga
gactcgttggtggggatatatcgtgaccaggaggtcaattcgtcgaggactttgacgctt
gatctcacgcaatacgatggacaaacatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (58)   
   KEGG ORTHOLOGY (1)   
   RefGene (53)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (12)   
   Pfam (12)   
All databases (77)   

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