KEGG   Staphylococcus hyicus: SHYC_09440
Entry
SHYC_09440        CDS       T03578                                 
Symbol
addA
Name
(GenBank) ATP-dependent helicase/nuclease subunit A
  KO
K16898  ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
Organism
shu  Staphylococcus hyicus
Brite
KEGG Orthology (KO) [BR:shu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:shu03400]
    SHYC_09440 (addA)
Enzymes [BR:shu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SHYC_09440 (addA)
DNA repair and recombination proteins [BR:shu03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    AddAB pathway proteins
     SHYC_09440 (addA)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PDDEXK_1 DEAD ResIII AAA_12 DUF3799 DUF5413
Other DBs
NCBI-ProteinID: AJC96619
Position
complement(1948776..1952414)
AA seq 1212 aa
MTIPEKPNEVQWTDAQWESIYAKGKDILVAAAAGSGKTAVLVERIIQRILRDGIDVDRLL
VVTFTNLSAREMKHRIEARIHQAALEDPSNQHIKNQMAKIHQAQISTLHSFCLKLIQQHY
DILNIDPNFRTASEVENVLLLESVIDEVFEAHYAQLDPHFIDLTEQVGSDRNDERLRQII
KSLYYFSVANPEPEKWLNQLDAPYVERHMQNHYLNIINQYILLYLKAAHDAIEQAYAHLE
LLGELDKHIVFIDNHRRALQHLLSESQINKKKIQTYEFGRMPTKPKDIGKDEMLNDMYET
FKAYFDQFKTFMSKVKDELAARDDNALISELAHLAPRVRYLSQLTQDVIVTFNKAKRERN
LLDFTDYEHFALKILYDDNGRPSNIANVYRDKYEEILVDEYQDTNRVQEQIISSFKRGSA
SNGNLFMVGDVKQSIYKFRQADPSLFIEKYEAFNQTDHSGWRIDLSQNFRSRKEILNTTN
YLFHHMMDREIGEIEYDAAARLYYGAPFDDVSVPLHLNVLLEDESSELTGSEQEAHLIAT
QVDTIINTKKVYDVKTKLYRPATYKDIVILERSYSNARHLQHVFKDRDIPLYVNSKQGYF
EQTEIRLMLSFLRVIDNPLQDIYLVGLMRSVIYQFTEDELAEIRVVSPHDDYFYQSIQHY
MNAETAQRDLVDKLSRFLNDLSNYRIYSQSHPVYQLIDKIYNDHYLIQYFSGLVGGKGRR
ANLHGLFNKAVDFEQSSFRGLFQFIRFIDQMIERGKDFGEENVIGPNDNVVRMMTIHSSK
GLEFPFVIYSGLTRDFNMTDLNQPVILNQYEGIGLQYYDEMHGIFYPSLISMSIELVNRK
EIISEEMRLIYVALTRAKEQLFLIGREKKESKLYALTEAPIAHDKLTPLYRFNARNPFEL
IYSILSKYKHSSLVDALRFKDEQEKEMALTPSITIHHIQASDILPQSHHEDTRLSIEMLD
AETTHAVQNEMLIKEIENRLLFKYPHEQDQYLASKQSVSELKRQLDTEQSDTNYDRVRQY
RLGVATYQRPAFLESQKRTATEVGTLMHTVMQHLPFNEARLSDEALHEYITSLVTRAIIP
EDAVKDIRLEDVKRFIQSELYMEIAQSDAFYRELPFIVNQHDMESGEHDTDAAIIQGMID
VVFVKNGKYYFVDYKTDAFVRRRGMSDEAVGEQLKAKYRIQMNYYQKALETITGHNVSGY
LYFFKYGALAID
NT seq 3639 nt   +upstreamnt  +downstreamnt
atgacaatacctgaaaaacccaatgaagtacaatggacggatgcgcaatgggagagtata
tatgcaaaagggaaagatatacttgtagctgcagcagctgggtcaggtaaaacggcagtc
ttagtagaacgcattattcaacgtatccttagagatggtatcgacgtagaccggttactc
gttgtgacatttacaaatttaagtgcgcgtgaaatgaagcatcgaattgaagcgcgaatt
catcaagcagcacttgaagacccttcgaatcaacatattaaaaaccaaatggcgaaaata
catcaagcgcaaatttcaaccttgcacagtttttgtttaaaattgattcaacaacattat
gatattttaaatattgatccaaatttccgaacggcaagtgaagttgaaaatgtgctactt
ttagaatcggttattgatgaggtttttgaagcacattatgcgcaattagaccctcatttt
atagatttaacagaacaagtaggctcggatcgtaatgatgaacgcctcagacaaatcatc
aaaagtttgtattactttagtgttgctaatcctgaaccagaaaagtggttgaatcaacta
gatgcgccttatgttgaacgccatatgcaaaaccattaccttaacattattaatcaatat
attttgctttatttaaaggcagcacacgatgcaatcgaacaagcctatgcgcatttggaa
ttgttaggtgagttggacaagcacattgtttttatagataatcatcgtcgtgcgttgcaa
catcttctatctgaatctcaaataaataaaaagaaaattcaaacgtatgaatttgggcgc
atgcctacgaaaccgaaagatattggtaaggatgagatgttaaatgacatgtatgagaca
tttaaagcttattttgatcaatttaaaacattcatgtcgaaagtcaaagatgaacttgcg
gcacgagatgataatgcacttatatctgaacttgcacacttggcgcctcgtgttcgttat
ttaagtcaattaacgcaagatgttattgtaacatttaataaagctaaacgtgagcgaaat
cttttggattttacagattatgaacattttgctttgaaaattttatacgatgataatggt
cgaccttcaaacatcgcaaacgtttatagagataaatatgaagaaattttagtcgatgaa
tatcaagatacaaatagagtgcaagaacagattatctcaagctttaaacgagggtctgca
tcaaatggtaatttatttatggttggagacgtgaaacaatcgatttataaatttagacaa
gcagatccaagtttattcatcgaaaaatacgaagcgtttaatcaaacagatcacagtggt
tggcgcattgatttgtcgcaaaattttcgctctcgtaaagagatattaaatacaaccaat
tatttgtttcatcatatgatggaccgggaaataggcgaaatcgagtatgatgccgctgca
agattatattacggcgcaccgtttgatgatgttagtgttcctttgcatttaaatgtactc
cttgaagatgaatccagtgagttaactggatctgaacaagaagcacatttgattgcgact
caagtagacactatcatcaacacgaaaaaagtatacgatgtgaaaacaaagctataccgt
ccagcgacgtataaagatatcgtaattttggaaagaagttacagtaatgcacgacacttg
caacatgtatttaaagatagggatatccctttatatgtgaatagtaaacaggggtacttt
gaacaaactgaaatacgtttaatgctttcgttcttgagggtcattgataatccactccaa
gatatttatcttgttggattgatgcgctcggtaatctatcagtttacagaagatgaacta
gcagaaattcgtgttgtctcaccgcatgatgattatttttatcaatctatccaacattac
atgaatgcggaaacggcacaacgtgatttagttgataaattatcgcgatttttaaacgat
ttgtctaactatcgtatatacagtcaaagtcacccggtctatcaattaattgataagatt
tataatgaccattatctaattcagtatttcagtggattagtcggtgggaaagggcggcgc
gcaaacctacatggacttttcaataaagctgtcgactttgaacaatcgagttttagaggt
ttgtttcaattcattcgttttatcgatcaaatgattgaacgcggtaaagactttggtgaa
gaaaatgttatcggaccaaatgacaatgtagtgcggatgatgacgattcatagtagtaag
ggacttgaatttccgtttgtcatatattctggccttacacgtgactttaatatgaccgat
ttgaatcaacctgttattttaaatcaatatgaaggaataggattacaatattatgatgaa
atgcatggcatattttatccgtcattgatttcaatgagtattgaattggttaatcgtaaa
gaaattatttccgaggaaatgagattgatttacgtcgcattaacgcgggcgaaagaacag
ttgtttttaataggtcgtgagaaaaaagaaagtaagttatatgctttaacagaagcgcca
attgcgcatgataagttgacgccactttatcgttttaatgccagaaatccttttgaattg
atttacagtattttaagtaagtataagcattcctcactggtggatgctttgcgatttaaa
gatgaacaagaaaaagaaatggcgcttacaccatcaattacaattcatcatattcaagca
tcagatattttgcctcaatcacatcatgaggatacccgattaagtattgagatgttagat
gcagagaccacgcacgccgtacaaaacgagatgcttatcaaagagattgaaaaccgacta
ttatttaaatatcctcatgaacaagaccaatatttagcatccaaacagtcagtctctgaa
ttaaaacgtcagctcgacacagagcaatctgacacaaactatgaccgtgtccgccaatat
agacttggggtcgcaacatatcaacgaccagcatttttagagtctcaaaaacgtacagcg
actgaagttggaacactgatgcatacagtgatgcaacatttgccttttaatgaagcgcgt
ctttcagatgaggcattacacgaatatatcacatcactcgtcacacgtgctatcattcct
gaagatgcagtgaaagatattcgattagaggatgtgaagcggtttattcagagtgagttg
tacatggaaatcgcacaaagtgacgcattctatcgtgaattaccttttattgtaaatcaa
catgatatggaatcaggagaacatgacacggatgcggccattattcaagggatgattgat
gtggttttcgtgaaaaatggaaagtactattttgtcgattataagacagatgcttttgtt
agacggcgtggtatgtcagatgaagcggtcggtgaacagcttaaagcgaaatatcgaatt
caaatgaattattaccaaaaggctttggaaacgataacaggacacaatgtttcgggttat
ttatacttcttcaagtatggtgccttagcaattgattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (10)   
   Pfam (10)   
All databases (18)   

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