KEGG   Stella humosa: STHU_26810
Entry
STHU_26810        CDS       T06078                                 
Name
(GenBank) DNA-directed DNA polymerase
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
shum  Stella humosa
Pathway
shum03030  DNA replication
shum03430  Mismatch repair
shum03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:shum00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    STHU_26810
   03430 Mismatch repair
    STHU_26810
   03440 Homologous recombination
    STHU_26810
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:shum03032]
    STHU_26810
   03400 DNA repair and recombination proteins [BR:shum03400]
    STHU_26810
Enzymes [BR:shum01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     STHU_26810
DNA replication proteins [BR:shum03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     STHU_26810
DNA repair and recombination proteins [BR:shum03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     STHU_26810
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon
Other DBs
NCBI-ProteinID: BBK32047
Position
complement(2826393..2829836)
AA seq 1147 aa
MSHADFVHLRTHSAYSLSEGALKTKDLVKLCIQGGMPAVAVTDTGNLFGALEFATEAASS
GVQPITGSLFGITRVGGRPAGPGLPQTPDRMVLLVQDETGYRNLLKLVSRAFMESDGTRE
AQLSLAELDGFTDGLIALVGAPDSPLGRLLVDGQKEAAEQCLATLRALFPGRLYIELQRH
GVPAEEAIEADLLDLADRTGLPLVATNDAFFSDRTMYEAHDALICIAGGVTVSTDQRRRL
TPEHGFKSAAEMRELFADLPEAIDNTLVVAQRCAFMPEKRKPILPPFASDSGREEPAELH
AQATLGLDGRLAAMTDHPDPAPYRERLEFELDVIVRMGFAGYFLIVADFIQWAKRQGIPV
GPGRGSGAGSVVAWALSITDLDPLRHGLLFERFLNPERVSMPDFDIDFCQDRRDEVIRYV
QQRYGRDRVAQIITFGKLQARAVLRDVGRVLEMPYGQVDRLCKLVPNNPANPVTLRQAID
GEPLLQSMRDDDEAVARLIRIALQLEGLYRHASTHAAGVVIGDRPLDELVPLYRDPRSDM
PVTQFNMKYVELAGLVKFDFLGLKTLTVLVKAQALLRNRGIEIDLTNLPLDDGPTFEMLS
RADATGVFQLESQGMRDVLRKLRPDRFEDIVAVVALYRPGPMENIPRYIACKHGEEQPDY
LHPMLEPILKETSGIMIYQEQVMQIARTLSGYSLGGADLLRRAMGKKIKEEMEAQRKAFV
DGAVANGVDKGTAAHVFDQVAKFAGYGFNKSHAAAYALVAYQTAYLKANYPVEFFAASMS
LDLGNTDKLNTFRQELARLGIPLLPPDVNHSQVEFSVETGKDGKGCVRYALAGLKGVGIP
AMQNMVAVRGDKPFAGLEDFAARIDARAVTKKQVEALARAGAFDAFNKNRAQMMAAAETI
VREAAAAASDRDSRQETLFGGVAAPQWRLPAVEEWNLFDKLQNEFEAIGFYLSNHPLDAY
GKSLERIGVTRAADLPARFSLGGSTRVKLAGIVVSKRERTSARGNRFAFVQMSDASGLFE
IAVFSEVLSVARELLDSGQPILVVADARVEGDSMRLGAVQIDALDKVAASAAAGMRIYLG
GTTALEGLKRLIAKEASGRGGRGRINLVLDIDTGREVEVALPGSYRVTPQVRAAVTSMVG
VVQVQDI
NT seq 3444 nt   +upstreamnt  +downstreamnt
atgtcccacgcggacttcgtccatctgcgcacccattcggcctattcgctgtccgaaggg
gcgctcaagaccaaggacctggtgaagctctgcatccagggcgggatgccggcggtcgcc
gtgaccgatacgggcaacctgttcggggcactggagttcgcgaccgaggcggcatcgtcg
ggtgtgcagccgatcaccggcagcctgttcggcatcacccgcgtcggcggccggccggcc
gggccgggcctgccgcagacgcccgaccgcatggtgctgctggtccaggacgagaccggc
tatcgcaacctgctgaagctggtcagccgcgccttcatggaaagcgacggcacgcgcgag
gcgcagctttccctggccgagctggacgggttcactgacggcctgatcgcgctggttggc
gcgcccgacagtccgctcggccggctgttggtcgatggccagaaggaagcggccgagcag
tgcctggcgacgctgcgcgcgctctttcccgggcgcctctatatcgagttgcaacggcac
ggcgtgccggccgaggaggcgatcgaggcagatctgctcgacctggctgaccgcaccggc
ctgccgctggtcgccaccaacgacgccttcttctccgaccgcacgatgtacgaggcccat
gatgcgctgatctgcatcgcgggcggcgtcaccgtgtcgaccgaccagcgccggcggctg
acgcccgaacatggcttcaagtcggcggccgagatgcgcgagctgttcgccgacctgccg
gaggcgatcgacaacaccctggtcgtcgcgcagcggtgcgccttcatgcccgagaagcgc
aagccgatcctgccgccttttgccagcgacagcgggcgggaggagccggccgaactgcac
gcccaggcgacgttgggcctggacgggcggctggcggccatgaccgatcatcccgacccg
gccccctatcgcgagcggctggagttcgagctggacgtcatcgtccgcatgggcttcgcg
ggctacttcctcatcgtcgccgacttcatccagtgggccaagcgccagggcatcccggtg
gggccggggcgcggatcgggagcgggctcggtagtcgcctgggcgctctcgatcaccgac
ctcgacccgctgcgccacggcctgttgttcgagcgcttcctcaaccccgagcgcgtgtcg
atgcccgacttcgacatcgacttctgccaggatcgccgcgacgaggtcatccgctacgtc
cagcagcgctacggccgcgaccgcgtggcccagatcatcaccttcggcaagctgcaggcg
cgcgccgtgctgcgcgacgtcggccgggtactggagatgccctatggtcaggtcgaccgg
ctgtgcaagctggtcccgaataacccggcgaacccggtcacgctgcgccaggcgattgac
ggcgaaccgctgctgcaatccatgcgcgacgacgacgaagcggtcgcccgcctgatccgc
atcgccctgcagctcgaggggctctaccgccacgcctcgacccacgcggccggcgtcgtc
atcggcgaccggccgctggacgaactggtgccgctctaccgcgacccgcgctccgacatg
ccggtcacgcagttcaacatgaagtatgtcgagctggccgggctggtgaagttcgacttc
ctcggcctcaagaccctgaccgtgctggtgaaggcccaagcgctgctgcgaaaccgcggc
atcgagatcgacctgaccaacctgccgctcgacgacgggccgaccttcgagatgctgagc
cgggcggatgcgaccggcgtgttccagctggaaagccagggcatgcgcgacgtgctgcgc
aagctgcggccggaccgcttcgaggacatcgtcgccgtcgtcgccctctatcgccccggc
ccgatggagaacatcccgcgctacatcgcctgcaagcatggcgaggagcagccggactac
ctgcacccgatgctggagccgatcctcaaggaaacctccgggatcatgatctaccaggag
caggtgatgcagatcgcccgcaccctgtcgggctacagcctcggtggcgccgacctgctg
cgccgggccatgggcaagaagatcaaggaggagatggaggcccagcgcaaggcgttcgtc
gacggcgcggtcgccaacggcgtcgacaagggcacggcggcccacgtcttcgaccaggtg
gcgaagttcgcgggctacggcttcaacaagtcgcacgcggccgcctacgcactggtcgcc
taccagacggcctacctcaaggccaactacccggtggagttcttcgccgcctcgatgtcg
ctcgaccttggcaacaccgacaagctgaacacctttcgccaggagctggcccggctcggc
attccgttgctgccgcccgacgtcaaccattcgcaggtcgagttctcggtcgagaccggc
aaggacggcaagggctgcgtgcgctacgccctggccgggctgaagggcgtcggcatcccg
gcgatgcagaacatggtggcggtgcgcggcgacaagcccttcgccgggctggaggatttc
gccgcccgcatcgacgcccgcgcggttaccaagaagcaggtggaggcgctggcccgtgcc
ggcgccttcgacgccttcaacaagaaccgcgcccagatgatggccgccgccgagacgatc
gtgcgcgaggccgccgccgccgcgtccgaccgcgacagccggcaggagacgctgttcggc
ggcgtcgcggcaccgcagtggcggctgccggcggtggaggagtggaacctcttcgacaag
ctgcagaacgaattcgaggcgatcggcttctacctgtcgaaccatccgctcgacgcctat
ggcaagagcctggagcgcatcggcgtcacccgcgcggccgacctgccggcgcgcttttcg
ctgggcgggtcgacccgggtgaagctggccggcatcgtcgtcagcaagcgcgagcgcaca
tcggcccgcggcaaccgcttcgccttcgtgcagatgtcggatgcgagcggcctcttcgag
atcgcggtcttttccgaggtgctgagcgtcgcccgcgagttgctggacagcggccagccg
atcctggtggtggccgatgctcgggtggagggcgattcgatgcggctgggggcggtgcag
atcgacgcgctggacaaggtcgcggcatcggccgccgccggcatgcgcatctatctgggc
gggaccacggcgctcgaggggttgaagcgcctcatcgccaaggaggcgtcgggccgcggc
ggtcgcggtcgcatcaacctggttctcgacatcgacacgggccgtgaggtcgaggtggcg
ctgccgggcagctatcgcgtgacgccgcaggtgcgcgcggccgtcaccagcatggtcggc
gtcgtccaggtgcaggacatctag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system