KEGG   Shewanella sp. W3-18-1: Sputw3181_0614Help
Entry
Sputw3181_0614    CDS       T00453                                 

Definition
(GenBank) alpha-L-glutamate ligases, RimK family
  KO
K05844  ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
Organism
shw  Shewanella sp. W3-18-1
Brite
KEGG Orthology (KO) [BR:shw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:shw03009]
    Sputw3181_0614
Enzymes [BR:shw01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.-  
     Sputw3181_0614
Ribosome biogenesis [BR:shw03009]
 Prokaryotic Type
  ribosomal protein modification factors
   Sputw3181_0614
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: RimK Rimk_N GSH-S_ATP ATP-grasp_3 ATPgrasp_ST Dala_Dala_lig_C
Motif
Other DBs
NCBI-ProteinID: ABM23465
UniProt: A1RFM0
Position
673355..674260
Genome map
AA seq 301 aa AA seqDB search
MKIGILSQFPQLYSTQRLVAACESRGHEAVVINTLNCYMNINSIKPSIHYEGQELVGFDA
IIPRIHASVTFYGCAVVRQFEMMGVFVANDSISIARSRDKLRALQLLSRKGIGMPITGFA
NKPNDIPDLINMVGGAPLVIKLLEGTQGIGVVLAETKTAAESVIEAFLGLKANILVQEYI
KESNGSDIRCFVVGDKVVASMKRQGPEGDFRSNLHLGGCGETVKITSVERKMAIAAVKAM
GLVVAGVDILRSNRGPLILEVNSAPGIEGIEQTTGISVTEPIVEYIEKMVAARKTNRPII
A
NT seq 906 nt NT seq  +upstreamnt  +downstreamnt
atgaaaataggtatcttatcccagtttcctcaactgtattcaacgcaacgtttagtcgcc
gcctgtgagagtcgtggccatgaagcggttgtgatcaatactctgaactgttatatgaat
atcaactcgatcaaacccagtattcattatgagggacaggagttggttggattcgatgca
atcattcctcgaatccatgcaagtgtgactttttatggttgtgcagtggtacgtcagttt
gaaatgatgggtgtatttgtggctaatgactcgatttcgatagcccgatcccgtgataag
ttaagggcattgcagttgctttctcgtaaagggataggtatgccaattacggggtttgcg
aataaacctaatgatattcctgatttaatcaatatggtgggaggtgctcccttagtgatt
aaactgcttgagggtactcaaggtattggtgttgtgttagcagagacgaaaaccgcggca
gagagcgtgatcgaagcttttttaggattgaaagccaatatcttagtgcaggaatatatt
aaagagtctaacggaagcgatattcgctgttttgttgtaggtgataaagttgtcgcttcg
atgaaacgccaaggaccagaaggagattttcgctctaatcttcatttgggcggttgtggt
gaaacggtaaaaatcacctccgtcgagcgtaagatggcgattgcagccgtaaaggccatg
gggcttgttgtcgctggtgtggatattttacgctctaaccgtggccctttaattcttgaa
gtgaactcggcacctggcattgaaggtattgaacaaaccacagggatttcagtcactgaa
ccgatagttgaatatatcgagaaaatggttgcagcgcgtaaaacaaataggccaatcatt
gcttaa

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