KEGG   Shewanella sp. W3-18-1: Sputw3181_1232
Entry
Sputw3181_1232    CDS       T00453                                 
Name
(GenBank) serine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
shw  Shewanella sp. W3-18-1
Pathway
shw00260  Glycine, serine and threonine metabolism
shw00460  Cyanoamino acid metabolism
shw00630  Glyoxylate and dicarboxylate metabolism
shw00670  One carbon pool by folate
shw00680  Methane metabolism
shw01100  Metabolic pathways
shw01110  Biosynthesis of secondary metabolites
shw01120  Microbial metabolism in diverse environments
shw01200  Carbon metabolism
shw01230  Biosynthesis of amino acids
shw01240  Biosynthesis of cofactors
Module
shw_M00140  C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:shw00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    Sputw3181_1232
  09102 Energy metabolism
   00680 Methane metabolism
    Sputw3181_1232
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    Sputw3181_1232
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    Sputw3181_1232
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    Sputw3181_1232
Enzymes [BR:shw01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     Sputw3181_1232
SSDB
Motif
Pfam: SHMT Aminotran_1_2 Beta_elim_lyase OKR_DC_1 DegT_DnrJ_EryC1 Cys_Met_Meta_PP
Other DBs
NCBI-ProteinID: ABM24075
UniProt: A1RHD0
Position
1394885..1396138
AA seq 417 aa
MLKKDMNIADYDPELFNAIQNETLRQEEHIELIASENYTSPRVMEAQGSQLTNKYAEGYP
GKRYYGGCEYVDVVETLAIERAKQLFGATYANVQPHSGSQANSAVYMALLKPGDTVLGMN
LAHGGHLTHGSPVNFSGKLYNIIPYGIDESGKIDYEEMERIAIEHKPKMMIGGFSAYSGI
VDWAKMREIADKIGAYLFVDMAHVAGLIAAGVYPNPVPHAHVVTSTTHKTLAGPRGGVIL
SAADDEDLYKKLNSAVFPGGQGGPLMHVIAGKAVAFKEALEPEFKVYQQQVVNNAKAMVE
VFLERGYKIVSGGTSNHLMLVDLIGRDLTGKEADAALGSANITVNKNSVPNDPRSPFVTS
GVRIGTPAITRRGFKEAESKELTGWICDILDDANNPAVIERVKGQVLALCARFPVYG
NT seq 1254 nt   +upstreamnt  +downstreamnt
atgctgaaaaaagatatgaatatcgcagattatgatccggaactgtttaacgcaattcag
aatgaaactctgcgtcaagaagagcatattgagctgattgcttctgaaaactacaccagt
ccacgcgtgatggaagcgcaaggttcacagttaaccaataagtacgctgaaggctatcca
ggcaagcgttactacggtggttgtgagtatgtggacgtagttgaaaccttagcgattgaa
cgtgctaaacaactgtttggcgcaacttacgctaacgtacaacctcattcaggttcacag
gcaaacagcgctgtttacatggcattgttaaaacctggcgataccgtattgggcatgaac
ttagcccacggtggtcacttgacccacggttcacccgttaacttctctggcaaactgtac
aacatcattccttacggtatcgacgagtctggcaaaattgactacgaagagatggaacgt
attgccatagaacacaagcctaagatgatgatcggcggtttctctgcctattcaggtatc
gttgactgggcaaaaatgcgtgaaatcgcagataaaataggtgcttacctatttgttgat
atggcgcacgttgccggtcttattgctgcgggcgtttatccaaacccagtaccacacgcg
cacgttgtgacatctacgacccacaaaaccttagcgggtcctcgtggtggcgtgatctta
tctgctgctgacgatgaagacttgtacaaaaagttgaactctgcggtattcccaggcggt
caaggtggcccattgatgcacgttatcgctggtaaagcggtggcgttcaaagaagcccta
gagccagaatttaaagtttaccaacagcaagtggttaacaacgctaaagctatggttgaa
gtgttccttgagcgcggttacaaaatcgtctctggcggaaccagcaaccacttaatgcta
gttgacctgattggtcgtgacttaacgggtaaagaagccgatgccgccttaggtagtgct
aacattaccgtgaacaaaaactcagtgccaaatgatccacgttcaccctttgtgacatca
ggtgtgcgtatcggtacgccagccattacgcgccgcggctttaaagaagcggaatcgaaa
gagctgaccggctggatttgtgacatccttgatgatgctaacaatcctgcagtgattgag
cgtgttaaaggccaagtattggcactgtgcgcacgcttccctgtttacggttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (15)   
   KEGG PATHWAY (11)   
   KEGG MODULE (4)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (6)   
   Pfam (6)   
All databases (39)   

Download RDF
DBGET integrated database retrieval system