KEGG   Shewanella sp. W3-18-1: Sputw3181_3522
Entry
Sputw3181_3522    CDS       T00453                                 
Name
(GenBank) transcriptional regulator, Crp/Fnr family
  KO
K10914  CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
shw  Shewanella sp. W3-18-1
Pathway
shw02020  Two-component system
shw02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:shw00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Sputw3181_3522
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Sputw3181_3522
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:shw03000]
    Sputw3181_3522
Transcription factors [BR:shw03000]
 Prokaryotic type
  Helix-turn-helix
   CRP/FNR family
    Sputw3181_3522
SSDB
Motif
Pfam: cNMP_binding HTH_Crp_2 Crp HTH_23 RepL HTH_24 MarR MarR_2 HTH_28 Sigma70_r4 HTH_11 HTH_36 GntR TrmB HTH_7 HAV_VP
Other DBs
NCBI-ProteinID: ABM26334
UniProt: A0A6N3J8X7
Position
4019214..4019849
AA seq 211 aa
MALIGKPKPDPTLEWFLSHCHIHKYPAKSTLIHAGEDSDTLYYIVKGSVAVLIKDEEGKE
MILSYLNQGDFIGELGLFEEQAERTAWVRAKQACEIAEISYKKFKQLIQVNPEILMKLSA
QMAYRLQSTSQKVGNLAFLDVAGRIAQTLLHLAKQPDAMTHPDGMQIKITRQEIGQIVGC
SRETVGRILKMLEEQNLIQAHGKTIVVYGTR
NT seq 636 nt   +upstreamnt  +downstreamnt
atggctctgattggtaagccaaaaccggacccaactttggaatggtttttatcacactgt
cacattcataagtaccctgcaaagagcactcttatccatgctggtgaagattcagatacc
ctttattacatcgtaaaaggttctgttgccgtattgattaaagatgaagaaggtaaagag
atgatcctttcttatcttaatcaaggcgactttattggtgagttaggattatttgaagaa
caagcagaacgtaccgcttgggttcgagctaaacaagcatgtgaaattgcagaaatttca
tataaaaagtttaagcaactgatccaagttaaccctgaaattctgatgaaactgtctgct
caaatggcttatcgcctacaaagcacgagtcagaaagtcggcaatttagcgtttcttgat
gtcgcaggtcgtatagcacaaacattattgcacttagctaaacagcctgatgcaatgact
catcctgatgggatgcaaatcaagattactcgtcaagagattggccagattgtaggctgt
tcacgtgagactgtcggtcgaatcttgaaaatgcttgaagagcaaaatttaattcaagca
cacggcaaaacgatagtggtatacggtacccgttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (16)   
   Pfam (16)   
All databases (25)   

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