KEGG T02063: SHJG

Streptomyces hygroscopicus subsp. jinggangensis 5008: SHJG_5640

Entry

SHJG_5640         CDS       T02063

Name

(GenBank) integral membrane protein

K04567

lysyl-tRNA synthetase, class II [EC:6.1.1.6]

Organism

shy Streptomyces hygroscopicus subsp. jinggangensis 5008

Pathway

shy00970

Aminoacyl-tRNA biosynthesis

Brite

KEGG Orthology (KO) [BR:shy00001]
09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    SHJG_5640
09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:shy01007]
    SHJG_5640
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:shy03016]
    SHJG_5640
Enzymes [BR:shy01000]
6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.6  lysine---tRNA ligase
     SHJG_5640
Amino acid related enzymes [BR:shy01007]
Aminoacyl-tRNA synthetase
  Class II (A)
   SHJG_5640
Transfer RNA biogenesis [BR:shy03016]
Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    SHJG_5640
Prokaryotic type
   Other AARSs
    SHJG_5640

SSDB

Motif

Pfam:

LPG_synthase_C tRNA-synt_2_TM Gram_pos_anchor TauE

Other DBs

NCBI-ProteinID:

AEY90907

Position

complement(6439859..6441673)

AA seq 604 aa
MSAPQTASEQRTTTARQPSPVPPRIPAPRRAVHVLSPRLLRIGGGHRLRTRAATATVWYL
RLLAVLNLAAVVSLPFREEVHEHNAGEYFTPYLATAGLVSAALALFLAVVMRRRKRAAWL
FNLLLAGPLFGLYAVALTRAPYREHAFNWASTALTGLFVAALLLGRREFDAIGDRSNPRL
ALATGIGGTLAGGGLGTLLVHTTNKATGAGLKDEIAYTLLRGISVGPLADHVTAVQAPRW
ADVIVNVLMAVVFLAVLYACFRAPRGACLLAEEDEHRLRGLLERHGERDSLGYFALRRDK
AVIFSPSGKAAIAYRVVGGVSLASGDPLGDPEAWPGAIDAWLAEARRHAWTPAVMGASEE
AGTVYARHGLDALEIGDEAIVDLADFTLEGRAMRVVRQAHNRVRRAGCTVRVRRHEDIPP
EEMAVLVDRADHWRDGATERGFSMALGRLGDPADGRCVMLECRDADGEPRALLSFVPWGE
RGLSLDLMRRDRACENGLMEYMVVELLLQAKELGIDRVSLNFAMFRSVFERGARLGAGPV
LRLWRSTLAFFSRWWQIESLYRANAKYRPVWEPRFLLFAKSSDIPRIGLASARAEGFLTL
PGRS

NT seq 1815 nt +upstreamnt +downstreamnt
atgtccgctccacagacggcgtccgaacaacggacgaccaccgcacgacagccgtccccg
gtcccgccgcggatccccgctccccgccgcgccgtccacgtcctctccccccgcctcctg
cgcatcggcggcggccaccggctgcgcacccgcgccgccacggccaccgtctggtacctg
cgcctgctggccgtgctgaacctggcggcggtcgtgtccctccccttccgcgaagaggtg
cacgaacacaacgcgggcgagtacttcaccccgtacctggccaccgccggtctggtctcg
gcggccctcgccctgttcctcgcggtggtgatgcgccgtcgcaaacgagccgcctggctc
ttcaacctcctcctcgccggccccctcttcggcctctacgccgtcgccctcacccgcgcc
ccctaccgcgagcacgccttcaactgggcctccaccgccctcaccggcctgttcgtcgcc
gccctgctgctcgggcgccgcgagttcgacgccatcggcgaccgctccaacccgcgtctg
gctctcgccaccggcatcggcggcaccctcgccggcggcggcctcggcacgctcctggtc
cacacgacgaacaaggccaccggcgccggcctcaaggacgagatcgcctacaccctgctg
cgcggcatcagcgtcggcccgctcgccgaccacgtcaccgccgtccaggccccccgctgg
gcggacgtcatcgtgaacgtcctgatggccgtggtgttcctcgcggtcctctacgcctgc
ttccgcgccccgcgcggcgcctgcctgctcgcggaggaggacgaacacaggctgcgcggc
ctgctggagcggcacggcgagcgcgactccctcggctacttcgccctgcgccgcgacaag
gccgtcatcttctcccccagcggcaaggcggccatcgcctaccgtgtcgtcggcggggtc
agcctcgcctccggcgacccgctcggcgaccccgaggcctggcccggcgcgatcgacgcc
tggctcgccgaggcccgccggcacgcctggaccccggccgtgatgggcgcgagcgaggag
gcgggcaccgtctacgcccggcacggcctggacgcgctggaaatcggcgacgaggcgatc
gtggacctcgccgacttcaccctcgaaggccgggccatgcgcgtggtccgccaggcccac
aaccgggtccgccgggccggctgcacggtccgcgtccgccgccacgaggacatcccgccc
gaggagatggccgtcctcgtggaccgcgccgaccactggcgggacggcgccaccgaacgc
ggcttctccatggccctcggccgcctcggcgacccggccgacggccgctgcgtgatgctg
gagtgccgggacgccgacggcgaaccccgcgccctgctcagcttcgtgccctggggcgag
cgcggcctctccctggacctgatgcgccgcgaccgcgcctgcgagaacggcctgatggag
tacatggtcgtcgaactgctcctccaggcgaaggagctggggatcgaccgggtctcgctg
aacttcgcgatgttccgctcggtcttcgaacgcggcgcccgcctcggcgcgggcccggtg
ctgcgcctgtggcgctcgaccctcgccttcttctcccgctggtggcagatcgagtccctc
taccgggccaacgccaagtaccggccggtgtgggaaccccgcttcctgctcttcgccaag
agcagcgacatcccgaggatcggcctggcgagcgcccgcgccgagggcttcctgaccctg
ccgggccgctcatag

All links

Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (21)   

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