KEGG   Streptomyces hygroscopicus subsp. jinggangensis 5008: SHJG_5859
Entry
SHJG_5859         CDS       T02063                                 
Name
(GenBank) chaperonin GroEL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
shy  Streptomyces hygroscopicus subsp. jinggangensis 5008
Pathway
shy03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:shy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SHJG_5859
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:shy03019]
    SHJG_5859
   03110 Chaperones and folding catalysts [BR:shy03110]
    SHJG_5859
   03029 Mitochondrial biogenesis [BR:shy03029]
    SHJG_5859
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:shy04147]
    SHJG_5859
Enzymes [BR:shy01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     SHJG_5859
Messenger RNA biogenesis [BR:shy03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     SHJG_5859
Chaperones and folding catalysts [BR:shy03110]
 Heat shock proteins
  HSP60 / Chaperonin
   SHJG_5859
Mitochondrial biogenesis [BR:shy03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    SHJG_5859
Exosome [BR:shy04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   SHJG_5859
  Exosomal proteins of other body fluids (saliva and urine)
   SHJG_5859
  Exosomal proteins of breast cancer cells
   SHJG_5859
  Exosomal proteins of colorectal cancer cells
   SHJG_5859
  Exosomal proteins of bladder cancer cells
   SHJG_5859
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-ProteinID: AEY91126
Position
6664340..6665968
AA seq 542 aa
MAKILKFDEDARRALERGVNKLADTVKVTIGPRGRNVVIDKKFGAPTITNDGVTIAREVE
IEDPYENLGAQLVKEVATKTNDIAGDGTTTATVLAQALVREGLKNVAAGASPAALKKGID
AAVKAVSEDLLASARPIDEKSDIAAVAALSAQDQQVGELIAEAMDKVGKDGVITVEESNT
FGLELDFTEGMAFDKGYLSPYFVTDQERMEAVLEDPYILINQGKISAIADLLPLLEKVIQ
AGSSKPLLIIAEDVEGEALSTLVVNKIRGTFNAVAVKAPGFGDRRKAMLQDMAVLTGATV
ISEEVGLKIDQVGLDVLGSARRVTVTKDDTTIVDGAGKSEDVQGRVAQIKAEIENTDSDW
DREKLQERLAKLAGGVCVIKVGAATEVELKEKKHRLEDAISATRAAVEEGIVSGGGSALV
HASKVLDGNLDKSGDEATGVSVVRNAVVEPLRWIGENAGQEGYVIVSKVKDLDKGQGYNA
ATGEYGDLIKAGVIDPVKVTRSALENAASIASLLLTTETLVVEKKEEEPEAAGHGHSHGH
AH
NT seq 1629 nt   +upstreamnt  +downstreamnt
atggcgaagatcctgaagttcgacgaggacgcccgtcgcgcccttgagcgcggcgtcaac
aagcttgccgacaccgtgaaggtgacgatcggcccccgcggccgcaacgtcgtcatcgac
aagaagttcggcgcgcccaccatcaccaacgacggtgtcacgatcgcccgcgaggtcgag
atcgaggacccgtacgagaacctcggcgcgcagctggtgaaggaggtggcgaccaagacc
aacgacatcgctggtgacggcaccaccaccgccacggtcctcgcccaggcgctggtccgc
gagggcctgaagaacgtcgccgccggtgcctccccggccgccctgaagaagggcatcgac
gccgcggtcaaggccgtctccgaggacctgctcgcctcggcccgcccgatcgacgagaag
tccgacatcgccgccgtcgccgcgctgtccgcccaggaccagcaggtcggcgagctgatc
gccgaggcgatggacaaggtcggcaaggacggtgtcatcaccgtcgaggagtccaacacc
ttcggcctggagctggacttcaccgagggcatggccttcgacaagggctacctgtcgccg
tacttcgtgacggaccaggagcgcatggaggccgtcctggaggacccctacatcctcatc
aaccagggcaagatctccgccatcgccgacctgctgccgctgctggagaaggtcatccag
gccggctcctccaagccgctgctgatcatcgccgaggacgtcgagggcgaggccctgtcg
accctggtcgtcaacaagatccgcggcaccttcaacgccgtcgcggtgaaggcccccggc
ttcggcgaccgccgcaaggcgatgctccaggacatggccgtcctcaccggcgccaccgtc
atctccgaggaggtcggtctcaagatcgaccaggtcggcctcgacgtgctcggctccgcc
cgccgcgtcaccgtcaccaaggacgacaccacgatcgtcgacggcgccggcaagtccgag
gacgtgcagggccgcgtcgcccagatcaaggccgagatcgagaacaccgactccgactgg
gaccgcgagaagctccaggagcgcctcgccaagctggccggcggcgtgtgcgtgatcaag
gtcggcgccgccaccgaggtggagctgaaggagaagaagcaccgtctggaggacgccatc
tccgcgacccgcgccgcggtcgaggagggcatcgtctccggtggtggctccgccctggtc
cacgcctccaaggtgctcgacggcaacctcgacaagtccggcgacgaggccaccggtgtc
tccgtggtccgcaacgccgtggtcgagccgctgcgctggatcggcgagaacgccggccag
gagggctacgtcatcgtgtccaaggtcaaggacctggacaaggggcagggctacaacgcc
gccaccggcgagtacggcgacctgatcaaggccggcgtcatcgacccggtcaaggtcacc
cgctccgccctggagaacgccgcctccatcgcctccctgctgctcacgaccgagaccctg
gtcgtcgagaagaaggaagaggagccggaggccgcgggccacggccacagccacggccac
gcgcactga

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (13)   

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