KEGG   Streptomyces hygroscopicus subsp. jinggangensis 5008: SHJG_5989
Entry
SHJG_5989         CDS       T02063                                 
Name
(GenBank) RNA polymerase ECF-subfamily sigma factor
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
shy  Streptomyces hygroscopicus subsp. jinggangensis 5008
Brite
KEGG Orthology (KO) [BR:shy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:shy03021]
    SHJG_5989
Transcription machinery [BR:shy03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     SHJG_5989
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_ECF Sigma70_r4
Other DBs
NCBI-ProteinID: AEY91256
Position
6829463..6830125
AA seq 220 aa
MLGDDAELTAAVRAAQDGDETAFRTVYRAVHPRLLGYVRTLVGDLDAEDVASEAWLQIAR
DLHRFSGDADRFRGWAARIARNRALDHIRMRGRRPAIGGDETELTGRAAESDTAGEAIEA
LATDSTLSLIARLPQDQAEAVVLRVVVGLDAKTAAETLGKRAGAVRTAAHRGLKRLAELI
GADPESAGGLDALPPPREPRRGAVTSATVTHTRARTQKDM
NT seq 663 nt   +upstreamnt  +downstreamnt
gtgctgggggacgacgcggagctgaccgccgcggtgcgtgcggcacaggacggagacgag
accgctttccgtacggtgtaccgcgcggtgcatccgcgcctgctcggatacgtccgcacc
ctggtcggcgacctcgacgccgaggacgtcgcgtccgaggcctggctccagatcgcccgc
gacctgcaccgcttcagcggtgacgccgaccggttccgcggctgggccgcccggatcgcc
cgcaaccgcgccctggaccacatacgcatgcggggccggcgccccgccataggcggcgac
gagaccgagctgaccggccgcgccgccgagtccgacacggccggcgaggccatcgaggcc
ctggccaccgacagcaccctctccctgatcgcccggctcccgcaggaccaggccgaggcg
gtcgtcctgcgcgtggtcgtgggcctggacgccaagaccgccgccgagaccctcggcaaa
cgcgcgggcgccgtccgtaccgccgcgcaccgcggtctgaagcgcctcgcggagctgatc
ggcgccgatccggaatcggcgggcggactggacgcgctcccgccgccaagagaaccgcgc
cgaggcgcggtgacgtccgcaactgtgacgcatacgcgtgcgcggacgcagaaggacatg
tga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (10)   

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