KEGG   Sphingobium xenophagum: CJD35_05785
Entry
CJD35_05785       CDS       T05146                                 
Name
(GenBank) leucine--tRNA ligase
  KO
K01869  leucyl-tRNA synthetase [EC:6.1.1.4]
Organism
shyd  Sphingobium xenophagum
Pathway
shyd00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:shyd00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    CJD35_05785
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:shyd01007]
    CJD35_05785
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:shyd03016]
    CJD35_05785
   03029 Mitochondrial biogenesis [BR:shyd03029]
    CJD35_05785
Enzymes [BR:shyd01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.4  leucine---tRNA ligase
     CJD35_05785
Amino acid related enzymes [BR:shyd01007]
 Aminoacyl-tRNA synthetase
  Class I (U)
   CJD35_05785
Transfer RNA biogenesis [BR:shyd03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    CJD35_05785
 Prokaryotic type
    CJD35_05785
Mitochondrial biogenesis [BR:shyd03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    CJD35_05785
SSDB
Motif
Pfam: tRNA-synt_1_2 tRNA-synt_1 tRNA-synt_1g Anticodon_1 tRNA-synt_1e tRNA-synt_1f zf-ribbon_3 DNA_ligase_ZBD
Other DBs
NCBI-ProteinID: ASY44019
UniProt: A0A249MS94
Position
I:1192073..1194601
AA seq 842 aa
MQRRFNPLEADARWQAIWDEKQSFRADDASPKPRSYVLEMFPYPSGRIHIGHVRNYSMGD
VLARFRRMTGHEVLHPMGWDAFGMPAENAAMEKKVHPGKWTYENIANMKAQLKKLGFALD
WSRELATCHPDYYGHEQALFLDMLDAGLVYRKESAVNWDPVDMTVLANEQVIDGKGWRSG
ATVEKRKLSQWFLKITQFADDLLEGLKGLDQWPDKVRTMQENWIGKSVGLQFRFQPVAPF
ESEIEVYSTRPDTIFGASFVAIAADHPVAQQLAADNAQAQAFIDLCKAGGTTAAELETAE
KLGFDTGLTVTHPFDPAWQLPVFIANFVLMDYGTGAVMGVPAHDQRDLDFAHKYMLPVER
VVAAEGDEAAPIHDEAYVGLGRLVNSRFLDGMAVEEAKAAVIARAESEGWGAGKTVFRLR
DWGVSRQRYWGTPIPVIHCADCGVVPVPKAQLPVVLPDDVTFDIPGNPLDRHPTWKHVAC
PSCGKPAVRETDTLDTFADSSWYFIRFASQPKDKPFERATVEQWLPVGQYIGGVEHAILH
LLYARFWTRALQHMGQLGFAEPFTGLFTQGMVTHETYSREQGDGLPPVYFAPGEIERAAD
GATLIADKAPVEIGRVVKMSKSKKNVVDPDDIIAQYGADAVRWFMLSDSPPERDLPWTES
GIEGSWRFINRLWRLFGQVETGAEGQDKQLDRKLHQTIDGIAKDIEALSFNKAVAKIYEL
ANAVEKAAPSASRNAAIRALALLVAPMTPHLAEEAWADMGETGLIADAAWPEVDPALLVD
DEVTIACQVMGKLRDTITVPKGTAKDELERLALAAPNVMRILDGATPKKVIVVPDRLVNL
VI
NT seq 2529 nt   +upstreamnt  +downstreamnt
atgcaaaggcgcttcaatccgctggaggccgacgcccgctggcaggcgatctgggacgag
aagcagagttttcgggcggacgatgcttcgcccaagccgcgatcctatgtgctggagatg
ttcccctatccgtccgggcgcatccatatcggccatgtccgcaactattcgatgggggac
gtgctggcgcgcttccgccggatgacggggcatgaggtactgcacccgatgggctgggac
gcgttcggcatgccggccgaaaatgccgcgatggagaaaaaggttcatccgggcaaatgg
acctatgagaatatcgccaatatgaaggcgcagctcaagaaactgggctttgcgctggac
tggagccgggaactggccacctgccaccccgattattatggccatgaacaggcgctgttc
ctggacatgctggacgcagggctggtctatcgcaaggaatcggcggtcaattgggacccg
gtcgacatgaccgtgctggccaatgagcaagtgatcgacggcaagggctggcgatcgggc
gcgacggtcgagaagcgcaagctcagccaatggttcctgaaaatcacgcaatttgccgat
gatctgctggagggccttaaaggtctggaccagtggcccgacaaggtccgcacgatgcag
gaaaactggatcggcaagtcggtcgggctgcaattccgctttcagccggtcgcgccgttc
gagagcgaaatagaggtgtattccacccgccccgacacgattttcggggcgagcttcgtt
gcgatcgcggcggaccatccggtcgcgcagcagctggcggcggacaatgcgcaggcgcag
gcctttatcgatctgtgcaaggcaggcggcaccacggcggcggagctggaaacagcggag
aagctgggtttcgacaccggcctgaccgtcacccatccgttcgatcccgcatggcaactg
ccggtgtttatcgccaatttcgtgctgatggactatggcaccggcgcggtgatgggcgtt
cccgcgcatgaccagcgcgacctcgacttcgcgcacaaatatatgctgccggtcgagcgc
gtggtcgcggccgagggggacgaagcagcgccgatccatgacgaagcctatgtcgggctg
ggcaggctggtgaacagccgcttcctcgacggcatggcggtcgaggaggccaaggccgca
gtcatcgcgcgggccgaatccgaaggatggggcgcgggcaagacggtgttccgcctgcgc
gactggggcgtgtcgcgccagcgttattggggcacgccgatcccggtgatccattgtgcc
gattgcggcgtggtgccggtgcccaaggcgcaattgccggtggtgctgcccgacgatgtg
acgttcgacatccccggcaatccgctcgatcgccacccgacctggaagcatgtggcatgc
ccatcgtgcggcaagccggcggtgcgggaaaccgacacgctggatacgttcgccgattca
agctggtacttcatccgcttcgccagccagcccaaggacaagccgttcgaacgtgcgacg
gtggagcaatggttgccggtcggccaatatattggcggggtcgaacatgcgatcctgcat
ttgctctatgcccgtttctggacgcgcgcgctccagcatatggggcaattgggttttgcc
gaaccctttaccggcctgttcacgcaagggatggtgacgcatgagacgtatagccgcgaa
cagggcgatggcctgccgccggtctatttcgcgccgggcgagatcgaacgcgccgccgat
ggcgcgaccctgatcgccgacaaggcgccggtcgagattggccgggtcgtcaaaatgtcc
aagtccaagaagaatgtcgtcgatcccgatgacatcatcgcccaatatggcgcggacgcg
gtgcggtggttcatgctgtcggacagcccgccagagcgcgacctgccctggaccgaaagc
gggatcgagggatcgtggcgcttcatcaaccgcttgtggcggttgttcggtcaggtcgag
acgggagcggaagggcaggacaagcagctcgaccgcaagctgcaccagacgatcgacggg
atcgcgaaggacatagaggcgctgtccttcaacaaggcggtcgccaagatttacgaactg
gccaatgcggtggagaaagcggcaccgtccgcgtcgcgcaacgccgccattcgtgcgctg
gcgctgctggtcgcgccgatgaccccgcatctggcggaggaagcctgggccgatatgggc
gaaaccggcctgatcgccgacgctgcctggcccgaagtcgatccggctttgctggtggat
gacgaagtgaccatcgcctgccaggtgatgggcaagctgcgcgacaccatcaccgtgccc
aaggggacggcgaaagacgaattggagcgtctggcgctggccgcgcccaatgtcatgcgc
atcctggacggggcgacgcccaagaaggtcatcgtcgtgccggatcgtctggtgaatctg
gttatctaa

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (27)   

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