KEGG   Sphingobium xenophagum: CJD35_13410
Entry
CJD35_13410       CDS       T05146                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
shyd  Sphingobium xenophagum
Pathway
shyd00010  Glycolysis / Gluconeogenesis
shyd00020  Citrate cycle (TCA cycle)
shyd00260  Glycine, serine and threonine metabolism
shyd00280  Valine, leucine and isoleucine degradation
shyd00310  Lysine degradation
shyd00380  Tryptophan metabolism
shyd00620  Pyruvate metabolism
shyd00630  Glyoxylate and dicarboxylate metabolism
shyd00640  Propanoate metabolism
shyd00785  Lipoic acid metabolism
shyd01100  Metabolic pathways
shyd01110  Biosynthesis of secondary metabolites
shyd01120  Microbial metabolism in diverse environments
shyd01200  Carbon metabolism
shyd01210  2-Oxocarboxylic acid metabolism
shyd01240  Biosynthesis of cofactors
Module
shyd_M00009  Citrate cycle (TCA cycle, Krebs cycle)
shyd_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
shyd_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
shyd_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:shyd00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    CJD35_13410 (lpdA)
   00020 Citrate cycle (TCA cycle)
    CJD35_13410 (lpdA)
   00620 Pyruvate metabolism
    CJD35_13410 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    CJD35_13410 (lpdA)
   00640 Propanoate metabolism
    CJD35_13410 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    CJD35_13410 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    CJD35_13410 (lpdA)
   00310 Lysine degradation
    CJD35_13410 (lpdA)
   00380 Tryptophan metabolism
    CJD35_13410 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    CJD35_13410 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:shyd04147]
    CJD35_13410 (lpdA)
Enzymes [BR:shyd01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     CJD35_13410 (lpdA)
Exosome [BR:shyd04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   CJD35_13410 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 NAD_binding_8 FAD_oxidored DAO FAD_binding_3 HI0933_like GIDA Lys_Orn_oxgnase AlaDh_PNT_C GMC_oxred_N 3HCDH_N Amino_oxidase 2-Hacid_dh_C Thi4 NAD_binding_7
Other DBs
NCBI-ProteinID: ASY45320
UniProt: A0A249MVD0
Position
I:complement(2766884..2768299)
AA seq 471 aa
MADTYDLIVLGSGPGGYVAAIRAAQLGLKTAIVERENLGGICLNWGCIPTKALLRSAEIF
HYMQHAKDYGLAAEKISADIEAVVKRSRGVAKQLNQGVTHLMKKNKIAVHMGDGKLTGKG
KLTVTKDGKSEELTAKHIIIATGARARDLPQLKADGKRVWTYRHAMTPPEMPTKLLVIGS
GAIGIEFASFYNDMGADVTVVEMMDRIVPVEDADVSAFLEKAVKKQGMTVLTGAKIEKIA
TSDKGVTATIKDKAGKAIEAEYSHVIVAIGIVPNVENLGLEDVGVEPDQRYHIKTDAYGR
TNVEGFWAIGDVTAPPWLAHKASHEGVIVAEAIAQALGNKDVHPHAMDVRNIPGCTYCHP
QIASVGLTEAKAKEAGYEVKVGMFPFIGNGKAIALGEAEGFTKTVFDAKTGELLGAHMIG
AEVTEMIQGYTIGKTLETTEAELMHTVFPHPTISESMHESVLAAYGRALHI
NT seq 1416 nt   +upstreamnt  +downstreamnt
atggctgatacctacgatctcatcgtccttggctccggccccggcggctatgtcgccgcg
atccgcgccgcgcagcttggcctgaaaaccgccattgtcgagcgtgaaaatctgggcggc
atctgcctcaactggggctgtattcccaccaaggcgctgctgcggtcggccgagattttc
cattatatgcagcacgccaaggattatggcctggcggcggaaaagatcagcgccgacatc
gaagcggtggtgaagcgctcgcgcggtgtcgccaagcagcttaatcagggcgtgacgcac
ctgatgaagaagaacaagatcgccgtgcatatgggcgatggcaagctgaccggaaagggc
aagctgaccgtcaccaaggacggcaagtccgaagaactgaccgccaagcatatcatcatc
gcgacgggcgcccgcgcccgcgacctgccgcagctcaaggccgacggcaagcgcgtgtgg
acctatcgccacgccatgacgccaccggaaatgccgaccaagctgctcgtcatcggttcc
ggcgcgatcggcatcgaatttgccagcttctataacgacatgggcgctgacgtgaccgtc
gtggagatgatggaccggatcgtccctgtcgaggatgccgacgtttccgccttccttgaa
aaggcagtcaagaagcagggtatgaccgtgctgaccggcgcgaagatcgagaagatcgcg
accagcgacaagggcgtgaccgcgacgatcaaggacaaggctggcaaggcgatagaggcc
gaatatagccatgtcatcgtcgccatcggcatcgtccccaatgtcgaaaatctgggtctg
gaagatgtcggcgtcgaacccgaccagcgctatcatatcaagaccgatgcctatggccgc
accaatgtcgagggtttctgggcgatcggcgatgtgaccgctccgccatggcttgcgcac
aaggcgagccatgagggcgtgatcgtggccgaagccatcgcgcaggcgctgggcaacaag
gatgtccacccccatgcgatggatgtgcgcaacatccccggctgcacctattgccatccg
cagatcgccagcgtcggcctgaccgaagcaaaggccaaggaagcgggttacgaggtcaag
gtcggcatgttcccgttcatcggtaatggcaaggcaatcgcgcttggcgaagcggaaggc
ttcaccaagaccgtgttcgacgccaagaccggcgagttgctgggcgcgcacatgatcggc
gcggaagtcacggagatgatccagggctatacgatcggcaagacgctggaaacgaccgag
gcggaactgatgcacacggtattcccgcatccgaccatttcggaatcgatgcatgaaagc
gtgctggcggcctatggccgtgcgctccatatctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (23)   
   KEGG PATHWAY (16)   
   KEGG MODULE (7)   
Chemical substance (27)   
   KEGG COMPOUND (27)   
Chemical reaction (11)   
   KEGG ENZYME (1)   
   KEGG REACTION (10)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (19)   
   Pfam (19)   
All databases (88)   

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