KEGG T04278: shn

Shinella sp. HZN7: shn_22180

Entry

shn_22180         CDS       T04278

Name

(GenBank) MFS transporter

K03500

16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]

Organism

shz Shinella sp. HZN7

Brite

KEGG Orthology (KO) [BR:shz00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:shz03009]
    shn_22180
Enzymes [BR:shz01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.176  16S rRNA (cytosine967-C5)-methyltransferase
     shn_22180
Ribosome biogenesis [BR:shz03009]
Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    shn_22180

SSDB

Motif

Pfam:

Methyltr_RsmB-F Methyltransf_25 Ubie_methyltran Methyltransf_31 MTS Methyltransf_15 Methyltransf_12 FtsJ Methyltransf_24 DUF3646 Cons_hypoth95 PCMT PrmA Methyltransf_4

Other DBs

NCBI-ProteinID:

ANH06477

UniProt:

A0A1A9G5N0

Position

complement(4632624..4633913)

AA seq 429 aa
MRLGGRLSGAIEVLTDIETRRRPVADALKDWGLSHRFAGSGDRAAIGNIVYDALRMRLSH
AYLMDDDSPAALGHAVLLRQWGLAPEALAAEFDGDRFAPEPISDEKLAAFRARDLEDAAP
HVQGDIPEWIQPAFEANFGEAWLTEAKALAGRPTLDLRANTLKAGRDKVLKALERNAAVA
STIAREGIRIPAGEGPSRLPNVTADLAFQKGWFEVQDEGSQIVADLVVPQEGEQVLDFCA
GGGGKTLAMAAAMHNKGQVHAYDTDRKRLAPIIERLKRAGTRNVQVHETIASLAPLNGRF
DRVLVDAPCTGTGTWRRRPDTKWRLTEKNLEERLTQQQEALANASAFVRPGGFLLYVTCS
ILPQENEEQVHGFCAVIPEFEILSATDTWKKLFGADKPQPWSRDGKTVTLTPASTDTDGF
FFCAMGRRA

NT seq 1290 nt +upstreamnt +downstreamnt
atgcgattgggtgggcggctctcgggagccatcgaggttctgacggatatcgagacgcgg
cggcgccccgtcgccgatgcgctcaaggactggggcctctcccatcggttcgccggctcc
ggcgaccgcgccgcgatcggcaatatcgtctatgacgcgctgcgcatgagactgtcgcac
gcctacctgatggacgacgacagccccgccgccctcggccatgccgtgctcctgcgccag
tggggcctcgcccccgaggcgcttgccgccgagttcgacggcgaccgttttgccccggag
cccatttccgacgaaaagcttgccgccttccgcgcccgcgatctcgaggacgccgcgccg
catgtgcagggcgacattcccgaatggatccagcccgccttcgaggccaatttcggcgag
gcctggctgacggaggccaaggcgcttgccggccggccgacgctggacctgcgcgccaac
acgctgaaggccggccgcgacaaggtgctgaaggcgctggagcgcaacgccgccgtcgcc
tcgaccatcgcccgcgagggcatccgcattcccgccggcgaaggcccctcgcgcctgccg
aacgtcaccgccgacctcgccttccagaagggctggttcgaggtgcaggacgaaggctcg
cagatcgtcgccgatctcgtcgtaccccaggagggcgagcaggtgctcgacttctgcgcc
ggcggcggcggcaagacgctcgccatggcggcggccatgcacaacaagggccaggtgcac
gcctacgacaccgaccgcaagcgcctcgccccgatcatcgagcggctgaagcgtgccggc
acgcgcaatgtccaggtccacgagaccattgccagccttgccccgctgaacggccgtttc
gaccgcgtgctggtcgacgccccctgcacgggcaccggcacctggcgccgccggccggac
accaaatggcgcctcaccgaaaagaacctcgaggaacgcctcacccagcagcaggaagcg
cttgccaatgccagcgccttcgtgcgtccgggcggcttcctgctctatgtcacctgttcg
atcctgccgcaggagaacgaggaacaggtgcatggcttctgcgcggtcattcctgagttc
gagattctctccgccaccgacacctggaagaagctgttcggcgcggacaagccgcagccc
tggtcgcgcgacggcaagaccgtcaccctgacgccggcctcgaccgatacggacggcttc
ttcttctgcgcgatgggccgcagggcctga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (14)   
   Pfam (14)   
All databases (25)   

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