KEGG   Shinella sp. HZN7: shn_27475
Entry
shn_27475         CDS       T04278                                 
Name
(GenBank) peptide ABC transporter substrate-binding protein
  KO
K02035  peptide/nickel transport system substrate-binding protein
Organism
shz  Shinella sp. HZN7
Pathway
shz02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:shz00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    shn_27475
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:shz02000]
    shn_27475
Transporters [BR:shz02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Peptides/nickel transporter
    shn_27475
SSDB
Motif
Pfam: SBP_bac_5
Other DBs
NCBI-ProteinID: ANH07895
UniProt: A0A1A9G9X9
Position
pShin-03:complement(52807..54387)
AA seq 526 aa
MILKSMLRAALVATMLPSPIAALAADLVIATKNGPASMDPHFTATSANAEATKHIFDTLL
RSGNNLEILPSLATSWQALDDTTWEFKLRQGVKFHDGSDFTAEDVKFSIERIPNVTGPNP
STIYVRRVASVEIIDDYTLRVKTNGPAPTLPNDFIRLFIVSHKAAADYSTKDSSAEGFNM
GKATIGTGPYKFVSWAPTQDLVLEKFDGYWDGAQPWDKVIRKEIPNDAARVAQLKAGQVD
LISKVPATDLASIESDSALQVIKTESIYIPYLEFDFRENSPQVWDNAGKTLDKNPFLDPK
VREAFDLALDRETIVEFALEGMGVVSTQLVSPNIFGYNTAIAAPAFDVEKALKLMAEAGY
PDGFKVALSYANDRMPTELGPTVAQLLAAINVTVDVQGVPAAVFNPAKTRGEYSLYMASW
GTLTGEANYMLSSLMHTNDAEKSLGAFNVRGYSNPQMDKLIEDAAVEMDEAKRRALLEEA
NMLVATDLPDLPLATNLSAWGAKADKVTYDPRSDEDTLAMDVHPKQ
NT seq 1581 nt   +upstreamnt  +downstreamnt
atgatattgaaatccatgctccgcgcagccctggtggccaccatgctgccgtcgcccatc
gccgcgctcgccgccgatctggtgatcgcgacgaagaacggcccggcctcgatggacccg
cacttcaccgcgacctcggccaatgccgaagccaccaagcacatcttcgacacgctgctg
cgctccggcaacaatctggaaatcctgccgtcgctggcgacgagctggcaggcgctggac
gacacgacctgggaattcaagctgcgccagggcgtgaagttccatgacggatccgacttc
accgccgaggacgtgaagttctccatcgagcgcatcccgaacgtcaccggcccgaacccg
tcgaccatctatgtacggcgcgtcgccagcgtcgagatcatcgacgactatacgctgcgc
gtgaagaccaatggtcccgcccccaccctgccgaacgatttcattcgcctcttcatcgtt
tcgcacaaggcggcagccgactactcgaccaaggacagctcggccgagggcttcaacatg
ggcaaggcgaccatcggcaccggcccctacaagttcgtgagctgggcaccgacgcaggac
ctggtgctggagaaattcgacggctactgggacggcgcccagccgtgggacaaggtcatc
cgcaaggaaatcccgaatgacgcggcccgcgtcgcccagctgaaggccggtcaggtcgac
ctcatctccaaggtgccggcaacggatcttgccagcatcgagtccgattccgccctgcag
gtgatcaagacggaatcgatctacattccctacctcgaattcgacttccgggagaactcc
ccgcaggtctgggacaatgccggcaagacgctcgacaagaaccccttcctcgatccgaaa
gtgcgtgaagcctttgatctggcgctcgaccgcgagaccatcgtggaattcgcgcttgag
ggcatgggcgtcgtctccacccagctcgtcagcccgaatatcttcggctacaacacggcg
atcgccgctccggccttcgatgtcgaaaaggcgctcaagctgatggccgaagccggctat
cctgacggtttcaaggtcgcgctcagctatgccaacgaccgcatgccgaccgaactcggc
ccgaccgtcgcccagcttctggccgcgatcaacgtcacggtcgatgtgcagggcgtaccg
gccgcggtgttcaacccggccaagactcgcggcgaatattcgctctacatggcctcctgg
ggcacgctgacgggcgaagccaactacatgctgtcgtcgctgatgcacaccaacgatgcg
gaaaagtcgctcggcgccttcaacgtgcgcggctattccaacccgcagatggacaagctg
atcgaggatgcagcggtcgagatggacgaagccaagcgccgcgccctgcttgaggaggcc
aacatgctggttgcgaccgacctgcccgacctcccgctggcgaccaacctgtctgcctgg
ggcgccaaggccgacaaggtgacctacgatccgcgctcggacgaggacacgctggccatg
gacgtccatcccaagcaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (16)   

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