KEGG   Shinella sp. HZN7: shn_33690
Entry
shn_33690         CDS       T04278                                 
Name
(GenBank) P-type conjugative transfer protein TrbJ
  KO
K20266  type IV secretion system protein TrbJ
Organism
shz  Shinella sp. HZN7
Pathway
shz02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:shz00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    shn_33690
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:shz02044]
    shn_33690
Secretion system [BR:shz02044]
 Type IV secretion system
  Trb secretion system protein
   shn_33690
SSDB
Motif
Pfam: Spc29 DUF2749 DUF4763
Other DBs
NCBI-ProteinID: ANH09071
UniProt: A0A1A9GF75
Position
pShin-10:complement(41831..42634)
AA seq 267 aa
MPSTSPAKRKLARALVAAAITFGTATPALSGAATGEATELTQLANNAELIKLLESSGVQV
ENQLTQISQLAEQIQNQLKMYDNMLQNTAQLPDHIWGQVEQDLGQLRDVVRQGEGIAFSM
GNADDVLQQRFKSYADLKDNLPNKESFATAYQNWSDTNRGTIAGTLSAASLTADQFDSEE
STMKELRGMSESADGQMKALQVGHQIAAQQVDQMQKLRGLVSQQMTMMGTWLQTEQSDKD
LAQVRRDRFFNAEVKSIPEGQKMEPRW
NT seq 804 nt   +upstreamnt  +downstreamnt
atgccatcgacgtccccagcaaaacgtaagctcgcccgcgcgctcgtcgccgccgcaatc
accttcggcacagccacaccggcgctttccggcgcggccaccggcgaggcgacggagttg
acccagctcgccaacaacgcggaactgatcaagctgctggaaagctcgggcgtgcaggtc
gagaaccagctgacgcagatcagccagctcgccgagcagatccagaaccagttgaagatg
tacgacaacatgctgcagaacaccgcgcagcttccggaccacatctggggacaggtggag
caggatctaggacagctccgcgatgtcgtcaggcagggggagggcatcgccttctcgatg
ggcaatgccgacgacgtcctccagcagcgtttcaagagctatgccgacctgaaggacaat
ctcccgaacaaggaaagcttcgccacggcctaccagaactggtccgacacgaaccgcggc
accatcgccggcacgctcagtgctgccagcctgaccgccgaccagttcgacagcgaggaa
agcacgatgaaggagctgcgcggcatgtccgagagcgccgacggccagatgaaggccctg
caggtcggccatcagatcgcggcgcagcaggtcgatcagatgcagaagctgcgtggcctc
gtttcccagcagatgacgatgatgggcacctggcttcagaccgagcagtccgacaaggat
ctcgcgcaggtacgacgtgaccggttcttcaacgccgaggtcaagtccattccagaaggt
cagaagatggagccgcgctggtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

Download RDF
DBGET integrated database retrieval system