KEGG   Shinella sp. HZN7: shn_34495
Entry
shn_34495         CDS       T04278                                 
Name
(GenBank) P-type conjugative transfer protein TrbJ
  KO
K20266  type IV secretion system protein TrbJ
Organism
shz  Shinella sp. HZN7
Pathway
shz02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:shz00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    shn_34495
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:shz02044]
    shn_34495
Secretion system [BR:shz02044]
 Type IV secretion system
  Trb secretion system protein
   shn_34495
SSDB
Motif
Pfam: DUF2749 MCPsignal COG3_N ANAPC4 FPP
Other DBs
NCBI-ProteinID: ANH09228
UniProt: A0A1A9GFE9
Position
pShin-12:6381..7190
AA seq 269 aa
MPKHSSRPLETARTVFVAAIALSATLPLPVQAGGVTGQATEWTQLANNAELVSLVGKSAE
QVNNQITQISQLAEQIQNQLNIYNNLLQNTAQLPHHIWGQVESDLKSLQNVVAQGQGVAF
SMGNIDDVLKQRFQSFAGMKSNLPDGASFSTTYQTWSDTNRDTIAGTLKAANLTADQFSS
EESTMSSLRSMSESSDGQMKALQVGHQIAAQQVAQMQKLRGLVSQQMTMMGTWFQSEQAQ
KDLAQARREQFFNGTERDIRGGQTMEPRW
NT seq 810 nt   +upstreamnt  +downstreamnt
atgccgaaacactcttcccgacctcttgagacagcccgcaccgtgttcgtcgcggcgatc
gccctctctgccacattgccactccccgttcaggccggtggcgtgacaggccaagcgacc
gaatggacgcagctcgccaacaatgccgagctcgtctcgctggtcggcaagtccgcggag
caggtgaacaatcagatcacccagatctcccagcttgcagagcagatccagaaccagctc
aacatctacaacaatctcctgcagaacaccgcccagctcccgcaccacatctgggggcag
gtcgaaagcgacctgaagagcctgcagaacgtcgtcgcgcaaggacagggcgtcgccttc
tcgatgggcaatatcgatgacgtgctgaagcagcgcttccagagttttgccgggatgaag
agcaatctgccagatggcgcgagcttttccacgacctaccagacctggtccgacacgaac
cgcgacacgatcgccggaacgctgaaggcagcgaacctgaccgccgaccagttctcgagc
gaggagagcacgatgtcgtcgctgcgctcgatgtcggagtcgtcagacggccagatgaag
gcgctgcaggtcggacaccagatcgccgcccaacaggttgcgcagatgcagaagttgcgg
ggcctcgtctcacagcagatgaccatgatgggaacgtggtttcagtccgagcaggcacag
aaggacttggcccaggcgcgtcgcgagcagttcttcaacgggaccgagcgtgacatacgc
gggggccagaccatggagccacgctggtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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