KEGG   Streptococcus intermedius B196: SIR_0424
Entry
SIR_0424          CDS       T02830                                 
Name
(GenBank) histone-like protein
  KO
K03530  DNA-binding protein HU-beta
Organism
sib  Streptococcus intermedius B196
Brite
KEGG Orthology (KO) [BR:sib00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sib03032]
    SIR_0424
   03036 Chromosome and associated proteins [BR:sib03036]
    SIR_0424
   03400 DNA repair and recombination proteins [BR:sib03400]
    SIR_0424
DNA replication proteins [BR:sib03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    SIR_0424
Chromosome and associated proteins [BR:sib03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    SIR_0424
DNA repair and recombination proteins [BR:sib03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      SIR_0424
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG DUF2267 HU-CCDC81_euk_2 Rpf1_C
Other DBs
NCBI-ProteinID: AGU75798
UniProt: T1ZCZ7
Position
403781..404056
AA seq 91 aa
MANKQDLIAKVAEATELTKKDSAAAVDAVFAAVTEFLSAGEKVQLIGFGNFEVRERAARK
GRNPQTGKEITIAASKVPAFKAGKALKDAVK
NT seq 276 nt   +upstreamnt  +downstreamnt
atggctaacaaacaagatttaatcgcaaaagtagcagaagctacagaattgactaaaaaa
gattcagcagcagcagttgatgcagtatttgcagcagtaactgaatttctttcagctggt
gaaaaagttcaattgattggttttggtaattttgaagttcgtgaacgtgcagctcgtaaa
ggtcgcaacccacaaactggtaaagaaatcacaattgcagcttctaaagtaccagctttc
aaagcaggtaaagctcttaaagacgctgtaaaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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