KEGG T02830: SIR

Streptococcus intermedius B196: SIR_0812

Entry

SIR_0812          CDS       T02830

Symbol

gyrA

Name

(GenBank) DNA gyrase subunit A

K02469

DNA gyrase subunit A [EC:5.6.2.2]

Organism

sib Streptococcus intermedius B196

Brite

KEGG Orthology (KO) [BR:sib00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sib03032]
    SIR_0812 (gyrA)
   03400 DNA repair and recombination proteins [BR:sib03400]
    SIR_0812 (gyrA)
Enzymes [BR:sib01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     SIR_0812 (gyrA)
DNA replication proteins [BR:sib03032]
Prokaryotic type
  DNA Topoisomerases
   SIR_0812 (gyrA)
DNA repair and recombination proteins [BR:sib03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      SIR_0812 (gyrA)

SSDB

Motif

Pfam:

DNA_topoisoIV DNA_gyraseA_C Retrotran_gag_2

Other DBs

NCBI-ProteinID:

AGU76180

UniProt:

T1ZE69

Position

complement(826564..829011)

AA seq 815 aa
MQDNNLVNVNLTSEMKTSFIDYAMSVIVARALPDVRDGLKPVHRRILYGMNELGVTPDKP
HKKSARITGDVMGKYHPHGDSSIYEAMVRMAQWWSYRHMLVDGHGNFGSMDGDGPAAQRY
TEARMSKISLEMLRDINKNTVDFADNYDSSEREPLVLPSRFPNLLVNGATGIAVGMATNI
PPHNLGETIDAVKLTMDNPDVTTRDLMEVLPGPDFPTGALVMGRSGIHRAYETGKGSIVL
RARTEIEETKSGRERIVITEFPYMVNKTKVHEHIVRLVQEKRIDGITAVRDESNREGVRF
IIEVKRDASAHVILNNLFKLTQMQTNFSFNMLAIQNGVPKILSLREILLAYIEHQKEVVT
RRTVFDKEKAEARAHILAGLLIALDHIDEVIRIIRNSETDAEAQAELMSRYELSERQSQA
ILDMRLRRLTGLERDKIQSEYDDLMKLIADLMDILAKPERVATIIKEELEEIKRKFSDER
RTELMVGEVLSLEDEDLIEETNVLITLSNKGYIKRLNQDEFTAQRRGGRGIQGTGVKDDD
FVRELVSTSTHDRLLFFTNKGRVYRLKGYEIPEYGRTAKGLPIVNLLKLDEGETIQTIIN
VQAEHDTHSYLFFTTRHGVVKRTSVTEFANIRQNGLKALNLKEEDELINVFLTNGQADII
IGTKMGYAVRFNENQVRNMGRSATGVRGVNLRTDDHVVGASVISDNQEVLVITEKGYGKR
TLASEYATKGRGGKGMKTANITEKNGPLAGLMAVNGDEDLMIITNTGVIIRTNVANISQT
GRATLGVKVMRLDKGAQIVTFTSVTADNEKEEDED

NT seq 2448 nt +upstreamnt +downstreamnt
atgcaggataataatttagtcaatgtgaacttaacgagcgaaatgaagacgagttttatc
gattacgccatgagtgtcattgtggctcgtgcccttcctgatgttcgagatggtttaaag
cctgtccatcgaagaatattgtatggaatgaatgaactaggtgtaacccctgataaacca
cataagaaatctgctcgtatcacgggtgatgttatgggtaaatatcacccacatggagat
tcctccatttatgaagctatggtgcggatggcacaatggtggtcttatcgtcacatgtta
gtagatggtcatgggaactttggttctatggatggcgatggtcctgccgcgcaacggtac
acagaagctcgtatgagtaaaatttcccttgaaatgttgcgcgacattaataaaaataca
gttgattttgcagataactatgatagtagtgagcgtgaaccattagtcttaccgtcgcgt
tttcctaatttgctggtcaatggagcaactggtattgctgtggggatggctaccaatatt
cctcctcacaatcttggtgaaaccattgatgccgttaaattgaccatggacaatccagat
gtaacaacgcgcgatcttatggaagtattacctggaccagattttccaacaggtgcttta
gtaatgggaaggtcaggtattcatcgtgcttatgaaaccggtaaggggtccattgtttta
cgtgctcgaacagaaatcgaagaaactaaatctggacgtgaacgaattgttatcactgaa
tttccgtatatggttaacaagacaaaagtccatgaacatattgtccggctggttcaagaa
aaacggatcgatggaattacggcagtccgtgatgaatctaatcgagaaggagtgcgcttc
atcattgaagtaaagcgtgatgcaagtgcgcatgtgatcttgaacaacttgttcaaatta
acgcaaatgcaaacaaatttcagtttcaatatgttagcaattcaaaacggagtgcctaaa
attttgtctcttcgtgaaattttactagcttatattgaacatcaaaaagaagtggtaaca
cgtcggacggtttttgataaggaaaaggccgaagctcgtgctcatattttagcaggtttg
ttaattgcgcttgatcatattgatgaagtcattcgcattattcgaaatagtgaaaccgat
gctgaagcacaagcggaattaatgtcacgttatgagttatctgaacgtcaaagtcaagca
attctggatatgcgtcttcgtcgtttgacaggattggagcgcgataagatccagtctgaa
tatgatgacttaatgaaattaattgcagatttgatggatattttggcaaaaccggaacga
gtagctaccattatcaaggaagaattagaagagattaaacgtaagttctctgatgaacgc
cgcacggaattaatggttggtgaagtattatctctagaagacgaagatctcatcgaagaa
actaatgttttaatcactctttccaataaaggttatattaaacggctgaatcaggatgaa
tttactgcacaaagacgtgggggccgtggtattcaaggaacaggtgtgaaagatgatgat
tttgttcgtgaattagtctctaccagcacacacgatcgcttactcttctttaccaataaa
gggcgtgtttatcgtttgaaaggttatgaaattcctgaatatggtcgtacagctaaagga
ttgccaattgtcaacttattgaaattggacgaaggtgaaacgattcagacaatcatcaat
gttcaagctgaacacgatactcattcttaccttttcttcactacacgccatggtgtggta
aaacgaactagcgtaacggaatttgctaatattcgtcaaaatgggttaaaagctctgaat
ttaaaagaagaagatgagttgattaacgtctttttgacaaatggacaagcggatatcatt
atcggaacaaaaatgggctacgctgtacgttttaacgaaaaccaagttcggaatatggga
cgtagtgcgactggtgtgagaggagtaaatttgcgtacggatgaccatgttgtaggcgct
agtgtcatttcagataatcaagaagtattagttattactgaaaaaggttatggtaagcga
actttagccagtgagtatgctacgaaaggtcgtggcggaaaaggaatgaaaacagctaat
attactgagaaaaatggtccattagcaggcttgatggccgtgaatggtgatgaagatttg
atgattatcacgaatacaggggtcatcattcgaacgaatgttgctaatatttctcagaca
ggccgtgcgactttaggtgttaaagtaatgcggctcgataaaggagcacagattgttacc
tttacaagcgttacagcggataatgaaaaagaagaggatgaagattaa

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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