KEGG   Streptococcus intermedius B196: SIR_1155
Entry
SIR_1155          CDS       T02830                                 
Name
(GenBank) putative ABC-type bacteriocin transporter
  KO
K20344  ATP-binding cassette, subfamily C, bacteriocin exporter
Organism
sib  Streptococcus intermedius B196
Pathway
sib02010  ABC transporters
sib02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:sib00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    SIR_1155
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SIR_1155
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:sib01002]
    SIR_1155
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:sib02000]
    SIR_1155
Peptidases and inhibitors [BR:sib01002]
 Cysteine peptidases
  Family C39
   SIR_1155
Transporters [BR:sib02000]
 ABC transporters, eukaryotic type
  ABCC (CFTR/MRP) subfamily
   ABCC-BAC subgroup
    SIR_1155
SSDB
Motif
Pfam: ABC_membrane Peptidase_C39 ABC_tran ABC_ATPase SMC_N AAA_22 nSTAND3 Peptidase_C70 Zeta_toxin AAA_24 ATP-synt_ab NB-ARC AAA_33 AAA_5 AAA_29
Other DBs
NCBI-ProteinID: AGU76516
UniProt: T1ZFN9
Position
complement(1212231..1214381)
AA seq 716 aa
MNVKKTFVPQIDARDCGVAALASIAKYYGSDYSLAHLRELAKTSKEGTTALGIVQAAQEI
GFETRPIQGDMSLFDMEAIPYPFIVHVQKKGKLPHYYVIYKNTKKGLLVGDPDPSVKITK
ISKETFATEWTGVAIFLAPEPSYKPHKDKKNGLISLIPLIFKQKMLVTYIVLASLLVTLI
NIVGSYYLQGILDEYIPNQMRSTLGIVSIGLIITYILQQMMSFSRDYLLIVLSQRLTIDV
ILSYIRHIFELPMSFFATRRTGEIISRFTDANSIIDALASTILSLFLDLSILIIVGGVLL
LQNTNLFFLTLLAIPIYTVIIFAFIKPFEKMNHDVMQSNSMVNSAIIEDINGIETIKSLT
SEEARYQKIDSEFVNYLDKSFTLSKYSIFQTTLKQGFQLILNVLILWLGAHLVISEKISI
GQLITFTALLSYFTNSLESIINLQTKLQSAKVANKRLNEVYLVESEFKTKQTLTEKGFLA
GDITFHNVSYKYGFGRDTLSDINLTIKTGDKVSLVGISGSGKTTLAKMMVHFYEPYKGQI
RLNGNDLKMIDKKTLRQYINYLPQQAYIFSGSILENLTLGTNQIFSQKEIIRACEIAEIR
SDIEQMPMGYQTELSDGAGLSGGQRQRIALARALLTKSPILILDEATSGLDVLTEKKVID
NLMGLKDKTIIFVAHRLSISKRTNQVIVLDKGQIIETGSHAELMERQGFYHHLFNK
NT seq 2151 nt   +upstreamnt  +downstreamnt
gtgaatgttaagaaaacatttgttcctcaaatagatgcaagagattgcggtgtcgctgcg
cttgcttccattgcaaaatactatggttcagactactctcttgcacatctgagagaactt
gctaagacaagtaaagaagggacaacggctcttggaattgttcaagcagcgcaagaaata
ggttttgagacacgaccgattcaaggggatatgtctttgtttgatatggaagctattccc
tatccttttatcgttcatgttcagaaaaaaggtaaactcccacattattatgttatctat
aaaaatacgaaaaaaggtctgctagttggagatcctgatccaagtgtaaaaataaccaag
atctcaaaagaaacatttgcaacagaatggactggtgttgctatttttttagcaccagaa
cctagctataaaccacataaggataagaaaaatggtttgataagcttaattcctcttatt
tttaaacagaaaatgctggtcacctatattgttttagctagtctgcttgtgacactcatc
aatattgttggatcttactacctacaaggaattttagacgaatacattccaaatcaaatg
agatcaactcttggaatagtgtctattggtctgattattacttatattttgcagcaaatg
atgagtttttccagagattacttattgattgtacttagtcagcggctgaccattgatgtg
attttatcatatattcgacacatttttgaattaccaatgtctttttttgctacgagacgc
actggagagattatttctcgttttacagatgctaattccattattgatgctctcgcttct
acaatactttcactctttcttgacctttctattttgataatagtaggaggggtattatta
ttacagaataccaaccttttcttcctcactctgcttgctattcctatctatacggtgatt
atttttgcttttataaagccttttgaaaaaatgaatcatgacgtcatgcaaagcaattcc
atggtaaattctgctattatcgaagatattaatggcattgaaaccattaaatctttaaca
agcgaagaagctcgttaccaaaagatagacagcgaatttgtaaattatttagataaatct
tttacgcttagtaaatattctatttttcaaacaacccttaaacaaggatttcaattaatt
ttaaatgtgcttattttatggctcggtgcgcatttagttatatctgagaaaatctcaatt
gggcagctcatcacatttacggctctactttcttattttacaaattctcttgaaagtatt
attaatctgcaaactaagctgcagtcggctaaggttgctaacaagcggttgaatgaagtt
tatttagtagagtctgaatttaaaactaagcaaacacttacagagaaaggtttcttggct
ggtgatattacgttccataatgtctcctataaatacggcttcggacgagatacgttatcg
gatattaacttaacaataaaaacaggagataaggtgagcttagtcggcatcagtggttcg
ggaaagacaacacttgccaaaatgatggttcatttttatgagccttataaagggcaaatc
cgtctcaatggaaatgaccttaaaatgattgataagaagacacttcgtcaatatatcaat
tatttaccacaacaagcctatatttttagtggttccatcttagaaaatcttacattaggg
acgaatcaaatattttctcaaaaagagattattcgcgcttgtgaaattgcagaaattcgt
tcggatattgaacaaatgcctatgggatatcaaacagaattgtccgatggagctggtcta
tcaggtggacaaaggcaacgaattgctctagcacgcgccctcttaacaaagtcaccaatt
cttattcttgacgaagcaacgagcggattggatgttctaactgagaaaaaggtcattgac
aatctgatgggtttaaaagacaaaacgattatttttgttgctcatcgtctcagcatttca
aagcggacaaatcaggttattgttcttgataaagggcagattattgaaactggatcccac
gctgaattgatggaaagacaaggcttttatcatcatttatttaataaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (15)   
   Pfam (15)   
All databases (25)   

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