KEGG   Sulfolobus islandicus M.16.4: M164_1241
Entry
M164_1241         CDS       T00906                                 
Name
(GenBank) protein of unknown function UPF0027
  KO
K14415  tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
Organism
sid  Sulfolobus islandicus M.16.4
Brite
KEGG Orthology (KO) [BR:sid00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sid03016]
    M164_1241
Enzymes [BR:sid01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.8  3'-phosphate/5'-hydroxy nucleic acid ligase
     M164_1241
Transfer RNA biogenesis [BR:sid03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing ligase complex
    M164_1241
 Prokaryotic type
   tRNA splicing ligases
    M164_1241
SSDB
Motif
Pfam: RtcB
Other DBs
NCBI-ProteinID: ACR41845
UniProt: C4KGY1
Position
complement(1176622..1178070)
AA seq 482 aa
MQINITRVNSYEWRIDKGTQECMKVPVTIFADDVLIEKMKQDMTLRQATNVACLPGVQES
IYVLPDGHQGYGFPIGGIAATAIDEGGVVSPGGIGYDINCGVRLLRTNLDYKDVKPKLAQ
LVEELHRNVPSGVGSEGKVKLTSQQLDQVLAEGVAWAVDKGFGWKEDMNHMEQHGSWELA
DPSKVSPIAKQRGASQLGTLGAGNHFLEIQVVDKIFDPQIAKAIGVDHEGQVMVMVHTGS
RGLGHQVASDYLQIMERAMKKYNIQLPDRELAAVPFESREGQDYFHAMASGANFAWTNRQ
LITHWTRESFGRVFGVDPEKLDLNIVYDVAHNIAKIEEYVIEGKRKKVLVHRKGATRAFP
PGSPEIPADHRNIGQIVLIPGSMGTASYVMAGIPEGRRTWFTAPHGAGRWMSREAAVRNY
PANVVVETLAEKGIVVRAATRRVVAEEAPGAYKDVDRVAKVAHEVKIAKLVMRLRPIGVT
KG
NT seq 1449 nt   +upstreamnt  +downstreamnt
atgcagattaacattactagagttaattcatatgaatggcgtatcgataaaggtacccaa
gaatgtatgaaagttcccgttaccatatttgcagatgacgttttgattgagaaaatgaaa
caagatatgacattaagacaagctactaacgtggcttgtttacctggtgttcaagaatca
atttacgttttaccagatggccatcaaggttacggttttcctataggtggcatagcagct
actgcaattgatgaaggaggagttgtaagccctggaggcataggatatgatataaattgt
ggtgttagattactcagaaccaatttagattataaagacgtaaagccaaaattagcccag
ttagttgaggagctacatagaaacgtacctagtggtgtaggaagcgagggtaaagtgaaa
cttacctctcaacaattggatcaagtattagcagaaggagtagcgtgggcagtcgataag
ggctttggatggaaagaagatatgaatcatatggaacaacatggtagttgggagttggca
gacccttcgaaagtaagtccaatagctaaacaaagaggtgcttctcaattaggaacttta
ggagctggtaatcacttcttagaaattcaagttgttgataagatatttgatcctcaaatt
gctaaagcaataggagtggatcacgaaggtcaagtaatggttatggttcatacggggtca
agaggcctaggccatcaagtagctagtgattatttgcaaattatggaaagagccatgaag
aagtataacattcaattgccagatagggaactagccgcagttccctttgagagtagagag
ggtcaagattactttcacgcaatggcatctggagctaatttcgcgtggacgaatagacaa
ttaattacccattggacaagagagagctttggaagagtgttcggtgttgacccagagaaa
ttagatcttaatatagtttatgatgtagcgcataatatagccaaaattgaggagtatgta
attgagggaaaaaggaagaaagtattggtacataggaaaggtgctactagagccttccca
cctggcagtccagaaatccctgctgatcatagaaatattggtcagatcgtcttaatacca
ggtagtatgggtactgctagctacgttatggctggaataccagaaggtagaaggacatgg
tttactgcgcctcatggtgctggtaggtggatgtctagagaagctgcggtgagaaattac
cctgctaatgtagtagttgaaactttagctgaaaaaggtatagtggtaagggctgctacc
aggagggtagtagctgaagaggcacctggagcttataaagatgttgatagagtagctaaa
gtcgctcatgaagttaaaatcgctaaattggttatgcgattaagacctataggggttacc
aaaggatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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