KEGG   Streptococcus intermedius JTH08: SCIM_0107
Entry
SCIM_0107         CDS       T02156                                 
Symbol
clpC
Name
(GenBank) ATP-dependent Clp protease ATP-binding subunit
  KO
K03696  ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
sie  Streptococcus intermedius JTH08
Brite
KEGG Orthology (KO) [BR:sie00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:sie03110]
    SCIM_0107 (clpC)
Chaperones and folding catalysts [BR:sie03110]
 Heat shock proteins
  HSP100
   SCIM_0107 (clpC)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 ClpB_D2-small AAA AAA_5 AAA_16 Sigma54_activat Clp_N ATPase_2 AAA_22 AAA_14 IstB_IS21 NACHT nSTAND3 Mg_chelatase AAA_7 TniB AAA_18 AAA_25 RuvB_N AAA_28 AAA_24 DNA_pol3_delta2 Torsin TIP49 VapE-like_dom DUF87
Other DBs
NCBI-ProteinID: BAM22761
Position
135861..138290
AA seq 809 aa
MKYSKALTESIESAQLLASHFETDYLESWQLLIAMANNPYSVAGSVLNDYPLEIDDFEKA
AFHITGKVYQQEGDFTIWPFSYRMKVLFLTAEQIAGAVHANNLGTEHILLAMLFDQGSLA
ARILEFIGFSYEDKEGVLRMTDLRKNLEHKASWNKEDLKAIRHLNKSAAATRQTMANMMG
MPPATSGGLEDYTRDLTEMAHMGLLEPIIGRDKEISRILQILSRKTKNNPVLVGDAGVGK
TALALGLAQRVADGQVPNELAKMRVLELDLMNVVAGTRFRGDFEERMNNIINDIEADGHV
ILFIDELHTIMGSGSGIDSTLDAANILKPALAKGTLRTIGATTQEEYQKYIEKDAALSRR
FAKVTIEEATVADSIAILQGLKKSYEDHHKVVITDSAIETAVKYAHRYLTSKHLPDSAID
LLDEAAARVQNKSPQNHVKAELSAADEALMAGDWNKVDTLLEKESQPIVYKLRVKDEDVL
ATLSSLSGIPVQKLTQTDAKKYLNLEKELHKRVIGQNEAISAISRAIRRNQSGIRTSKRP
IGSFMFLGPTGVGKTELAKALAEVLFDDETALIRFDMSEYMEKFAASRLNGAPPGYVGYE
EGGELTEKVRNRPYSVLLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMT
SNLGATSLRDDKTVGFGARDVRFDHENMEKRMMEELKKAYRPEFINRIDEKVVFHSLTSE
DMQEVVKIMVQPLISSLAEKGIKLKFQPSALKLLAQEGYDPEMGARPLRRILQTRVEDHL
SELLLAGELKTGQSLKVGVKAGKLKFEVL
NT seq 2430 nt   +upstreamnt  +downstreamnt
atgaaatattcaaaagctttgacagaaagtattgaatcagcacagttattagcaagtcat
tttgaaacggattatttagagtcttggcagctgttgattgctatggcaaataatccttat
agtgttgctggttcagttttaaatgattacccacttgaaattgatgattttgaaaaggca
gcttttcatatcacggggaaagtctatcaacaagagggagactttactatttggccgttt
tcttatcgcatgaaagtgctatttttgactgctgaacaaattgcaggggcggttcatgct
aataatcttgggacagagcatatattgctagctatgttatttgaccaaggaagcttggca
gcgcgtattcttgaatttattggttttagttacgaagataaagaaggcgttttgcgcatg
acagatctgcggaaaaatttagagcataaggccagctggaataaagaggatttaaaggct
attcgtcacctaaataaaagtgctgcagcaacaagacaaacgatggctaatatgatggga
atgcctcctgcaaccagtggcggactagaagattatactcgtgatctaactgaaatggct
catatgggccttttagaaccgatcattgggcgggataaagagatttctcgcatacttcag
attttaagtcgtaagacaaaaaacaatccggttttggtaggagatgcaggagttgggaag
acagcattagctctgggtttggcgcaacgtgtggcagatggtcaagttccaaatgagctt
gcaaagatgagagttttagagctagatttaatgaatgtggtggctggaactcgttttcgt
ggtgattttgaagaacggatgaacaatattatcaatgatattgaagcagatgggcatgtt
attctcttcattgatgagcttcataccattatgggttctggcagcgggattgactcgaca
ttagatgcagcaaatattctcaagccggctttggctaaaggaacgctcagaacgatcggt
gcaacaacacaagaagagtaccaaaaatatatcgaaaaagatgcagctctttcacgaaga
tttgccaaggttactattgaagaagcaacggtagctgacagcattgctattttacaggga
ctcaagaaaagttatgaagatcaccacaaggtcgtgattacggattcggcaattgagacg
gctgttaagtatgcgcatcgttacctgactagtaaacatctacctgactcagcgattgac
ttgctagacgaagctgctgcaagggtacaaaataaaagcccgcaaaatcacgtaaaagca
gaattgagtgcagcagatgaggctttaatggcaggcgattggaacaaagttgatacgttg
ttggagaaagagagtcagccaattgtttataaattaagggtgaaagacgaggatgtttta
gcaacactcagcagtttatcaggtattcctgtgcaaaagttgacacaaacagatgcgaag
aaatacctcaatttagaaaaggagttacacaaacgagttatcgggcagaatgaagcaatt
tctgctattagtcgagcgattcggcgcaatcaatctggtatccgcactagcaagcgccca
attggctcctttatgttcttagggccaaccggggtcggaaaaactgagctagctaaggct
ttggcagaagttctctttgatgacgaaacagcgttaattcgttttgatatgtccgaatac
atggagaaatttgctgctagtcgtctcaatggagcacctccaggctatgttggttatgaa
gaagggggagaattaactgaaaaggtgcgtaatcgtccttactctgtgctcctctttgac
gaagtggaaaaagctcatcctgatattttcaatgtgctgctccaagtcctagatgacggg
gttctgacggatagcaagggccgtaaggtagatttttccaatactattatcattatgacc
agcaatcttggtgcgacaagtttacgggacgataagacggttgggttcggagcaagagat
gttcgctttgatcatgaaaatatggaaaaacgaatgatggaagagctaaagaaagcttat
cgtccagaatttattaaccgaattgatgaaaaggttgtttttcacagtttgactagcgaa
gacatgcaggaagtggtgaaaattatggtgcaaccgctcatttctagtcttgcagaaaaa
ggaattaaactcaaattccaaccgagtgctttgaagcttctagctcaagagggctatgat
cctgaaatgggagctcgtccattgcgtcgaattctacaaactcgagtggaagaccattta
tcagaattacttttagcaggtgagctaaaaacggggcaaagcttgaaagtcggtgtcaag
gctggaaaattgaagtttgaagtgctctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (27)   
   Pfam (27)   
All databases (33)   

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