KEGG   Sulfolobus islandicus HVE10/4: SiH_0063
Entry
SiH_0063          CDS       T01952                                 
Name
(GenBank) Rad50 recombination repair enzyme like protein
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
sih  Sulfolobus islandicus HVE10/4
Brite
KEGG Orthology (KO) [BR:sih00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sih03400]
    SiH_0063
DNA repair and recombination proteins [BR:sih03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     SiH_0063
    Archaeal homologous recombinant proteins
     SiH_0063
SSDB
Motif
Pfam: AAA_23 Rad50_zn_hook SMC_N AAA_15 AAA_13 AAA_21 AAA_29 ABC_tran GAS AAA_27 SbcC_Walker_B TMF_TATA_bd Filament Laminin_II DUF2203 DUF3090 ATG17_like RsgA_GTPase Nuf2_DHR10-like
Other DBs
NCBI-ProteinID: ADX81435
UniProt: F0NMQ6
Position
complement(52773..55367)
AA seq 864 aa
MRIDKITLTNFLSHEQSEIHFLGEINVIVGQNGAGKSSIIDGIVFSLFRTHSRGNNDNLI
RKGSNKASVTLHLSNEKDKIEIIRDIRSTTEDRLIRNQIPVARSATVVSNEIEKILGIDK
DIALSTIIVRQGELDKILENLQDIMGKILKLESIEKLIDSRGPIVEFKKNLENKLRELDR
IEQDYNDSKKNLEEKRNRVLELEKDRKKLEDEIKNLENQITELKKQFEDYEKKRNQYLEL
TTILKVKETKLNELNKSIEELRRQTENMDKLEKEVNELDNLKNFRLKFEKYEVLSRSYIE
ISNNILNLEKEIEEYEKAIKRKKELEPHYLRYKELERKLEELQPKHEEYLKSKSNLDSKL
NLKERLEKDASEFSKDIDRISNLEQIMEEKRKRQLDLRAQLGKVESLISEKNEIINNLSQ
VKGETCPVCGRPLDEEHKQKIVEEAKSYISRLELDKNELEEELKKTTDELNKIEKEYRKL
SNNKANYDNVIKQLRKLNEEIENLHNRIEALKDIEEEIKKINVEIKDLKQYYEEFMRLFK
YDEKELERKKNRLDEMKKKKVEIEKEMRALETELQGLDRKELENKISDLERKKKILDEMK
KKRGVLEDYIGQVELLQEDVKKLREKLNIIQFDENKYNELKTSLDVHNASLKEKENRKSR
VEGELDSLGKDIEEISNRIKNYELQLKDKEKIINGINKLEKIRDALGERKLQSYIIMATK
QLIENNLNDIISKFDLSIKNVEMEIMPKTSRGKGTGGNIVIYTNNGDTLPIVSLSGGERI
ALSIALRLAIAKALMSNTNFFILDEPTIHLDDQRKAYLIEIIRAAKESVPQILVVTHDEE
VVQAADYVIRVEKRGNKSFVREET
NT seq 2595 nt   +upstreamnt  +downstreamnt
atgagaattgacaaaattactttgactaattttttaagtcatgaacaaagtgaaatacac
tttctaggcgaaataaatgtaatagtgggacaaaatggagcaggtaagagttctataata
gatggcatagtattcagtttgtttagaacccatagtagaggaaataacgacaacttaata
agaaaaggctcaaataaggcgagcgttaccttacatctttctaatgaaaaagataaaata
gaaataataagggatataagaagcactacagaagataggttaatacggaatcaaatacca
gttgcacgtagtgcaacggtagtctctaatgaaatagagaaaattctgggtattgataaa
gatattgccctatcaacaataatagttagacaaggagaattggataaaattttggagaat
ttacaagacattatggggaaaattctaaagttggaatcaatcgagaagcttattgatagc
agaggtccaatagtggaatttaagaagaatttggaaaacaagttaagagagttagacagg
atagaacaagactataatgattctaagaagaacttggaggagaagagaaatagagtattg
gagttagaaaaagataggaaaaaactggaggatgagataaagaacttggaaaatcaaata
actgagttaaagaaacaattcgaagattatgagaagaaaagaaatcagtacttagagctg
accactatcttaaaggtaaaagaaactaaattaaatgaattaaacaagagtatagaagaa
ctaagaagacaaacggaaaacatggataagcttgaaaaggaggtaaacgaacttgacaat
ttaaagaattttagattaaaatttgaaaaatatgaagttttatcgagaagttatatagag
atatccaataatatacttaatttagaaaaggaaattgaggaatatgaaaaagctattaaa
agaaagaaagaacttgagccacattatctaagatacaaggaattggagagaaaactggaa
gaattacagccaaaacatgaagaatatctcaaatcgaaatccaatttagactccaaacta
aatttaaaagaacgtttagagaaagacgcaagtgagttttctaaagatatagatagaatt
agtaatcttgaacaaattatggaagagaaaagaaaaagacaacttgatcttcgagctcaa
ttaggtaaagttgaaagcctaatatctgagaaaaatgagataataaataatcttagtcaa
gttaagggggaaacttgtccggtatgtggaagacccctagatgaggaacacaaacaaaaa
atagtagaagaagcaaaaagttacatttcacgattagaattagataagaatgaactggaa
gaagaattaaagaaaaccactgatgaattaaataaaattgaaaaagaatatagaaaactc
tcaaataataaggcaaattacgataatgtaataaaacaacttagaaagttaaacgaggaa
atagagaatcttcataataggattgaagctttaaaggatatagaggaggaaattaagaaa
ataaatgtagaaataaaggacctaaaacagtattatgaagagtttatgagactatttaag
tatgacgagaaggaacttgaaagaaaaaaaaataggttagatgaaatgaagaagaaaaaa
gtagaaatcgaaaaagaaatgagggctctagaaaccgaattacaagggttagaccgtaaa
gagctggagaataaaatttcagatttagagaggaagaaaaaaatcttggatgaaatgaag
aagaaaagaggagtactagaagactatataggacaagttgagctactacaagaagatgtt
aagaaactaagggaaaaattaaatatcatacagtttgatgaaaataaatataatgaactt
aaaacgagtttagatgtccataatgccagtcttaaggagaaggaaaacagaaaaagtaga
gtggagggcgaattggatagtttaggtaaagacatagaggaaataagtaatcgaattaag
aattatgaattgcaactaaaagataaagaaaagataatcaatggtattaataagctggag
aaaattagagatgcattaggagaacgaaaattacagagttatataatcatggcaacaaaa
caattaattgaaaataatctaaatgatataatatcgaaatttgatctatctattaaaaac
gtagaaatggagataatgccaaaaactagtagaggaaagggcactggtgggaatatagta
atatacactaataacggcgatactttgcccatagtatcgcttagtggaggtgagagaatt
gccttatctatagctttaaggttagcaatagctaaggcactgatgagtaatactaacttc
ttcattcttgacgagccaacaattcatttagatgatcaaagaaaagcgtacttaatagag
ataattagggcagcaaaggaaagtgtacctcagatattagtggtaacacatgacgaggag
gtagtccaggcagctgattatgttattcgtgttgaaaagagaggaaataaaagttttgtg
agggaggagacttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (19)   
   Pfam (19)   
All databases (26)   

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