KEGG   Sulfolobus islandicus L.D.8.5: LD85_1569
Entry
LD85_1569         CDS       T01158                                 
Name
(GenBank) DEAD_2 domain protein
  KO
K10844  DNA excision repair protein ERCC-2 [EC:5.6.2.3]
Organism
sii  Sulfolobus islandicus L.D.8.5
Pathway
sii03022  Basal transcription factors
sii03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sii00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    LD85_1569
  09124 Replication and repair
   03420 Nucleotide excision repair
    LD85_1569
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sii03021]
    LD85_1569
   03400 DNA repair and recombination proteins [BR:sii03400]
    LD85_1569
Enzymes [BR:sii01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     LD85_1569
Transcription machinery [BR:sii03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     LD85_1569
DNA repair and recombination proteins [BR:sii03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     LD85_1569
SSDB
Motif
Pfam: Helicase_C_2 DEAD_2 ResIII DEAD AAA_22 nSTAND3 AAA_16 GvpD_P-loop AAA_19
Other DBs
NCBI-ProteinID: ADB87236
UniProt: D2PC16
Position
1377191..1378813
AA seq 540 aa
MEVVKLQLRHWQAEKLNDAINALRQGKTLLLNAKPGLGKTVFVEVLGMQLDKKVLIFTRT
HSQLDSVYKNAKLLGLKMGFLVGKSASCIYAQGDEEPDEINCSKCTLKDKIKAIEDREPS
KLLEEFKEATDYCPYYSLKVNLKDKDVIAMTYPYLFQKPIRNSVFCNKDDCLKLEDYLIV
IDEAHNLLEADKWFARKISRKTLEKALKEIEIVEKLSKVNAGRVREYINSLINYMSKLVR
DGRCHELSLMPLPNKETNDELVVITRAYLNIDEGPVKKSGLKALLKFIETEGELYNCNGS
LVKVPSDINELIEDALNVKTYKILMSGTLPESLTLTNSYKIIVNEGYGRGEYYYCPNVTS
ELRRRISNIPLYAMLLKRIYESSSKSVLSFFPSYEMLDRVRDKLSGIPVIEENRRTKHEE
VLELMKTGKYLVMLVMRAKESEGVEFRDKENLFESLVLAGLPYPNVSDDMVKKRIERLSK
LTGRNKDSIIHDLTAIVIKQTIGRAFRDPNDYVKIYLCDSRYKEYFPDLGLKEKEIKLFV
NT seq 1623 nt   +upstreamnt  +downstreamnt
atggaggtcgttaaattgcagttaaggcactggcaggcggagaaattaaacgatgctata
aacgcgttaagacaaggtaagactttattacttaatgcaaagcctggcttaggtaagacg
gtattcgtagaagttttgggcatgcaacttgacaaaaaagttctgatattcactagaact
cacagccagttggacagtgtttacaagaacgccaaacttttaggcttaaaaatgggcttt
ctggtcggtaagtccgcttcatgcatttacgcccagggtgatgaggaaccagacgaaata
aactgcagtaagtgtacgcttaaggataaaataaaggcgatagaggatagggaaccttcg
aagctccttgaggagtttaaggaggctacggactactgcccctattattcactgaaagta
aaccttaaggataaggacgtaatagcgatgacctatccgtatctattccagaaacctata
aggaattcggtgttctgtaataaggatgattgtctgaaactcgaagactatttgatcgtc
atagatgaagcacataacctactcgaagccgataaatggtttgcaaggaaaataagccgt
aaaacgcttgagaaggcattaaaagagatagagatagttgagaagcttagtaaggttaat
gcggggagggtgagagagtacattaactctctcattaactatatgagtaaactggtcaga
gacggaaggtgtcatgagttatcattaatgccgttaccaaataaggagacaaacgatgag
ttggtagtgataacgagggcgtatttgaatatagatgaaggccctgtaaagaagtccggt
ctaaaagcgttactaaagtttatcgagacggaaggagagctatataactgtaacgggagt
ctagttaaagtaccttcagacattaacgaattaattgaagatgcactcaacgttaaaacc
tataagatcctaatgagcggtacattacccgaatctctaacacttacaaattcctataaa
attatagtaaatgagggttacgggagaggagagtattattactgtccaaacgtaacttcg
gaactccgtaggaggatctctaacatccctctctacgccatgttactgaagaggatttat
gaaagtagtagtaagagtgtacttagtttctttcctagctacgaaatgctggatagagtt
agagataaactctcagggattcccgttattgaggagaataggagaacaaagcatgaggag
gttttggagctaatgaagaccggtaaatatttagtaatgttggtaatgcgtgctaaggag
agtgagggggtagaatttagagataaggagaatctatttgaaagtttggtgttggcgggg
ttaccttatcctaacgtttcggatgatatggtcaaaaagaggatagagaggttaagcaaa
ttaactggtagaaacaaggactcaataatacatgacttaactgcaatagtgatcaaacag
acaataggtagagcgtttcgtgaccctaatgactacgttaagatttacctttgtgattca
aggtataaggagtactttccggatttaggattgaaggaaaaagagattaagctttttgtt
tga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (21)   

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