KEGG   Scardovia inopinata: SCIP_1243
Entry
SCIP_1243         CDS       T03977                                 
Name
(GenBank) DNA glycosylase
  KO
K01246  DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
Organism
sij  Scardovia inopinata
Pathway
sij03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:sij00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    SCIP_1243
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sij03400]
    SCIP_1243
Enzymes [BR:sij01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.20  DNA-3-methyladenine glycosylase I
     SCIP_1243
DNA repair and recombination proteins [BR:sij03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     SCIP_1243
SSDB
Motif
Pfam: Adenine_glyco
Other DBs
NCBI-ProteinID: BAR07310
Position
1553886..1554461
AA seq 191 aa
MPKRCTWAAGGNELLKHYHDREWGTPCHSDQKLFELLSLEIFQAGLSWQTVLNKRQALDD
ALANFDFQILSSFEGQLPKLLTNQAIIRNQRKLLAIIHNARIVSDMVMRGQSFDAYLWQF
VHYQPIQHHYQSHLQIPKTNQLAIQISQTMKSAGFRFTGPVVSYSFLQAAGIINDHETTC
FRYSKLSQPKK
NT seq 576 nt   +upstreamnt  +downstreamnt
atgccaaaacgttgtacctgggcagccggtgggaatgagttgcttaaacactatcacgat
cgtgaatggggaacgccttgccatagtgatcagaagttgtttgaattattatcattggaa
atctttcaggcgggattaagttggcaaactgttctcaataagcgccaggcccttgacgat
gccttagcgaattttgattttcaaatattatcgtcttttgagggtcaattaccgaagtta
ttaactaatcaagcaatcattcgtaatcaaaggaaactgctagcgattatccataatgca
cgaattgtttctgatatggttatgcggggacaatcttttgacgcctatttgtggcaattt
gttcattatcaaccgattcaacatcactatcaaagtcatctacaaatcccgaaaaccaat
cagttagctatacaaataagtcagacaatgaagtctgctggatttcgatttaccggaccg
gtcgttagctattcgtttttacaggcagccggaattattaatgaccatgaaaccacctgt
tttcgctatagtaaattaagccagccaaaaaagtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (17)   

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