KEGG   Ruegeria pomeroyi: SPO0146
Entry
SPO0146           CDS       T00215                                 
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
sil  Ruegeria pomeroyi
Pathway
sil03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:sil00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    SPO0146 (mutM)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sil03400]
    SPO0146 (mutM)
Enzymes [BR:sil01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     SPO0146 (mutM)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     SPO0146 (mutM)
DNA repair and recombination proteins [BR:sil03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     SPO0146 (mutM)
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS
Other DBs
NCBI-ProteinID: AAV93474
UniProt: Q5LWT9
Position
161604..162455
AA seq 283 aa
MPELPEVETVRRGLAPAMEGAVIARAEVNRPDLRWPFPDRMAERLTGQRVERLRRRSKYI
LADLSGGETLLIHLGMSGRMTVSGDPLGQFVHDHPAAQKHDHVVFHMDNGARITFNDPRR
FGAMDLMATATADEHKLLMVLGPEPLGNDFHEDYLVAALKGRNTPVKSALLDQGIVAGLG
NIYVCEALFRAGVSPRRKAGQIAAARVSALVPIIRQVLSEAIEAGGSSLKDFRQADGELG
YFQHSFDVYGREGEPCRRAGCDGTVQRITQSGRSSFYCAQCQR
NT seq 852 nt   +upstreamnt  +downstreamnt
atgcctgaattgcccgaggtcgagaccgtgcggcgcggattggcccccgcgatggagggg
gcggtgatcgcgcgggccgaagtcaatcggcccgacctgcgctggcctttccccgatcgc
atggccgagcggctgacaggccagcgggtcgaacggctgcggcggcggtcgaaatacatc
ctggccgatctgtcggggggcgagacgctgttgatccatctgggcatgtcggggcggatg
accgtgtcgggtgacccgctggggcagttcgtgcatgaccacccggcggcgcagaaacat
gaccatgtggtgtttcacatggacaacggcgcccgcatcaccttcaacgacccgcgccgg
ttcggtgcgatggacctgatggccaccgcaaccgcggatgaacacaagctgttgatggtg
ctgggccccgagccgctgggcaacgattttcacgaggattacctggttgccgccctcaag
ggccgcaacacgccggtgaaatctgcgctgctggatcagggaatcgtggcggggctgggc
aatatctatgtctgcgaggcgctgttccgggccggggtgtcgccgcgtcgcaaggcggga
cagatcgccgccgcgcgggtctctgcgctggttccgatcattcgccaggtcctgtccgag
gcgatcgaggcgggtggatcctcgctcaaggatttccgccaagccgatggagaacttggg
tattttcagcacagcttcgatgtctacgggcgcgagggggaaccctgccgccgcgcgggc
tgtgacggcacggtgcagagaatcacccagtccggacgctcatccttctattgcgcgcaa
tgccaaagataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (79)   
   KEGG ORTHOLOGY (1)   
   RefGene (76)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (3)   
   Pfam (3)   
All databases (91)   

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