KEGG   Ruegeria pomeroyi: SPO2552
Entry
SPO2552           CDS       T00215                                 
Name
(GenBank) peptide/opine/nickel uptake family ABC transporter, permease/ATP-binding protein
  KO
K02031  peptide/nickel transport system ATP-binding protein
K02034  peptide/nickel transport system permease protein
Organism
sil  Ruegeria pomeroyi
Pathway
sil02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:sil00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SPO2552
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:sil02000]
    SPO2552
Transporters [BR:sil02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Peptides/nickel transporter
    SPO2552
SSDB
Motif
Pfam: BPD_transp_1 ABC_tran oligo_HPY AAA_21 OppC_N AAA_16 AAA_22
Other DBs
NCBI-ProteinID: AAV95802
UniProt: Q5LQD8
Position
complement(2702095..2703960)
AA seq 621 aa
MNLFLKLLFRNRLAAMGAVVLGAILLLVLLTPFLPLQDPDVTATADRFKRPFSEGHLLGT
DHLGRDLLSRLLHGTRLSLAVGIAAALVAATIGSTIGIVAGYFGGRVDNIIMRIVDMLMA
FPYILLALAIVAALGPGLMNALIAVAAVNVPFFARNIRGITVGLAGREFIDAARLAGMGH
ARIILTELLPNVLPVIVIAMSTTVGWMILETAGLSFLGLGSQPPQADLGSMLGEARSAMI
SHPHTSIVPGIMIFLIVMSINLLGDGVRDALDPRLRSGALSRPRATTLVERQGDIPAATD
DLLAIQELETQFHVGDRIYRAVGGVSLAVKPGECLGVIGESGSGKSVTALSVMGLVASPP
GVITGGAVRFQGEDLIGAPYETLRQRRGDRVAYIFQDPLSTLHPLYRIGQQLAEAIQSHH
KVSNAEARARAIQLLKDVRIPNAESRVDNYPHEMSGGMRQRVGIAMALANEPDVIIADEP
TTALDVTVQAQILSLLDDLRRDRGLAIIFITHDFGVVAQLCDRVAVMYAGRIVEQGPTQA
VLEAPAHPYTKRLIACVPELGGGRRELAAIPGLPPVVDNLPEGCAFAPRCDKAQESCRAG
DVALKGTAPRAVRCLYPEVAV
NT seq 1866 nt   +upstreamnt  +downstreamnt
atgaacctctttctcaagcttctgttccgcaaccgtctggccgccatgggggcggtggtg
ctcggcgcgatccttctgctggttctgctcacgcccttcctgccgctgcaggacccggat
gtgaccgccaccgccgatcggttcaagcgcccgttctccgagggccacctgctgggcacc
gaccatctgggccgcgacctgctcagccgattgctccatggcacccgcctgagccttgcc
gtcgggattgccgcggcgcttgtcgcggccacgatcggatcgaccatcggcatcgtcgcg
ggctatttcggcgggcgcgtggacaacatcatcatgcgcatcgtcgatatgttgatggcc
tttccctacatcctgctggcgctggccattgtggccgcccttggccccgggctgatgaac
gcgctgattgcggtggccgccgtaaacgtgcccttttttgccaggaatattcgcggtatt
accgtgggcctcgcggggcgcgaattcatcgacgccgcgcggctggcgggcatgggacac
gcgcggatcattctgaccgagcttttgccgaatgtcctgccggtcatcgtcatcgccatg
tcgaccacggtgggctggatgatcctggagaccgccggcctcagcttcctcggcctcgga
tcgcaaccaccgcaggccgatcttggctcgatgctgggcgaagcccggtcagcgatgatc
tcgcacccgcatacctcgatcgtgccgggcattatgatcttcctgatcgtcatgtcgatc
aacctgctgggcgacggggtgcgcgatgcgcttgacccacggctgcgctcgggtgcgctg
tcgcggccgcgggcgaccacgcttgtcgagcgccagggcgacatccccgccgcaaccgac
gatcttctggccatacaggaacttgaaactcagttccatgtgggcgaccgcatctatcgg
gccgtgggcggcgtctcgctggcggtaaagcccggggaatgcctgggcgtcatcggcgaa
agcggctcgggcaaatccgtcacggcgctgtcggtcatgggcctcgtggcctcgccgccc
ggcgtgatcaccgggggcgcggtgcgttttcagggcgaagacctgatcggtgcaccctat
gagaccctgcgccagaggcgcggcgaccgggtggcctatatcttccaggacccgctctcg
accctgcatccgctgtaccgcatcgggcaacaactggccgaggcgattcagtcgcatcac
aaggtttcgaatgccgaggcacgcgcgcgcgcgatccaactcctgaaagacgtgcgtatt
ccgaatgccgagtctcgggtagacaactatccacatgagatgtccggtggcatgcgccaa
cgggttggcatcgccatggcgctcgccaatgagcccgatgtgatcatcgcggatgagcca
acgacagcgctcgatgttaccgtgcaggcgcagatcctgtcgctgctcgacgacctgcgc
cgcgacaggggattggcgatcattttcatcactcatgacttcggggtcgtggcacagctg
tgtgaccgggtggcggtcatgtatgccgggcggattgtggagcaagggccgacgcaggcc
gtgctggaagccccggcacacccctataccaaacgcctgatcgcctgtgtgcccgagctt
ggcggcgggcggcgcgagctggcggccattcccggcctgccgccggtggtcgacaacctg
cccgagggctgcgcctttgccccgcgctgcgacaaggcgcaggagagctgccgcgccggg
gatgttgcactgaaaggcaccgcgccccgcgccgtgcgctgcctctacccggaggtggcc
gtctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (33)   
   KEGG ORTHOLOGY (2)   
   RefGene (29)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (45)   

Download RDF
DBGET integrated database retrieval system