KEGG   Ruegeria pomeroyi: SPO3196
Entry
SPO3196           CDS       T00215                                 
Name
(GenBank) DNA repair protein RecO, putative
  KO
K03584  DNA repair protein RecO (recombination protein O)
Organism
sil  Ruegeria pomeroyi
Pathway
sil03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sil00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    SPO3196
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sil03400]
    SPO3196
DNA repair and recombination proteins [BR:sil03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     SPO3196
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      SPO3196
SSDB
Motif
Pfam: RecO_C RecO_N
Other DBs
NCBI-ProteinID: AAV96431
UniProt: Q5LNK7
Position
3409224..3409949
AA seq 241 aa
MDWRDQGILLAVRRHGETSAIIDTFTASHGRHAGVVRGGTSRRIAPILQPGAQLDLSWRA
RLEDHLGSFTVEPLRSRAAAAMSGRLALAGLNAVVSLLSFCLPEREAHPRLYKQSEQLLD
LLGQDEIWPLAYLRWELALLDTLGFGLDLSSCAVTGNSDDLVYVSPRSGRAVSAGAAGEW
AERLLPLPPCLRGEGPAPDPEIAQALRTTGHFLEHRVAPALGHAPLPQARGRLLDLISRL
P
NT seq 726 nt   +upstreamnt  +downstreamnt
atggactggcgtgatcagggcatcctgctggccgtgcgccgccatggcgagacctcggcg
atcatcgacacctttaccgccagccatggccgccatgcgggcgtggtccgcggtggcacc
agccgccgcatcgcgccgatcctgcaaccgggtgcacagctcgacctcagctggcgcgcc
cggctggaggaccatctgggcagtttcacggtggaacccctgcgctcgcgcgcggcggcg
gcgatgtcggggcggctggcgttggccgggttgaatgcggtggtctcgctgctgtccttt
tgcctgcccgagcgcgaggcgcatccccgcctctacaagcaaagcgaacagctcctcgac
ctgttggggcaggacgagatatggccgctcgcctatctgcgctgggaactggcgctgctt
gacacgctgggatttggccttgatctgagcagctgcgcggtgaccggcaactcggacgat
ctggtctatgtctcgccgcgcagcgggcgcgcggtcagcgcgggcgcggcgggcgaatgg
gccgaacggctgttgccactgcccccctgcctgcgcggcgaaggcccggcgccggacccc
gagatcgcgcaggccctgcgcaccaccggccattttctggaacaccgcgtcgcgcccgcc
ctgggccatgcgccgctgccgcaggcacgcgggcggctgctcgacctgatcagtcggctg
ccctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (43)   
   KEGG ORTHOLOGY (1)   
   RefGene (40)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (2)   
   Pfam (2)   
All databases (51)   

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