KEGG   Ruegeria pomeroyi: SPO3637
Entry
SPO3637           CDS       T00215                                 
Symbol
uvrC
Name
(GenBank) UvrABC system protein C
  KO
K03703  excinuclease ABC subunit C
Organism
sil  Ruegeria pomeroyi
Pathway
sil03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sil00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    SPO3637 (uvrC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sil03400]
    SPO3637 (uvrC)
DNA repair and recombination proteins [BR:sil03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     SPO3637 (uvrC)
SSDB
Motif
Pfam: UvrC_RNaseH_dom HHH_5 HHH_2 UVR GIY-YIG HHH IMS_HHH
Other DBs
NCBI-ProteinID: AAV96860
UniProt: Q5LMC7
Position
complement(3837869..3839740)
AA seq 623 aa
MQDTNPSQPDSPITGYACIQDYLRNLSGAPGVYRMLDAQARVLYVGKARNLKARVSNYAR
PGHSPRIERMIRETASMMFLTTRTETEALLLEQNLIKQLKPKYNVLLRDDKSFPNILVAK
DHSFAQIKKHRGAKKEKGTYFGPFASAGAVNRTLNQLQKAFLLRNCTDAVFESRTRPCLL
YQIKRCSAPCVGLISDQDYAAAVKDAERFLSGRSTRVQEELAEQMMAASEAMEFERAAAL
RDRIRALTTVQGTQGINPRGVAEADVVALHLENGQACVQVFFIRANQNWGNRDFYPRVGE
DVSAAEVMEAFLGQFYDNKEPPRQLILSDAIENADLMTEALSEKAGRKVELLVPQRGEKA
ELVSGALRNARESLARRMSESATQTKLLGGLAEAFDLDGPPQRIEVYDNSHIQGTNAVGG
MIVAGPEGFLKNQYRKFNIRGDDLTPGDDFGMMKEVLTRRFTRLLKEDPDRDKGLWPDLL
LIDGGAGQVSAVHEIMMAHGVQDIPMVGVAKGIDRDHGKEEFHRTGQRPFALKRNDPVLY
FIQRLRDEAHRFAIGTHRAKRAKAVSATPLDDIPGVGAARKRALLAHFGSAKAVSRADLA
DLTAVEGVSAGLAQKIYDFFHES
NT seq 1872 nt   +upstreamnt  +downstreamnt
atgcaagacaccaacccgtcccaacccgattccccgattaccggttatgcctgtattcag
gactatttgcgcaacctgagtggcgcgcccggtgtctaccggatgctcgatgcgcaggcg
cgggtgctctatgtcggcaaggcgcgcaacctcaaggcgcgggtgtcgaactatgcccgt
ccgggccacagcccccggatcgagcggatgatccgcgagaccgcttcgatgatgttcctg
accacgcgcaccgagaccgaggcgctgctgttggaacagaacctgatcaagcagctcaag
ccgaaatacaacgtgctgctcagggacgacaaaagctttcccaatatcctggtggccaag
gatcattcctttgcccagatcaagaaacaccggggcgcgaagaaggagaagggcacctat
ttcggtcccttcgccagtgccggtgcggtcaatcgcaccctgaaccagctgcaaaaggcg
ttcctgctgcgcaactgcactgacgcggtgttcgaaagccgcacccgaccctgcctgctc
taccagatcaagcggtgctcggcgccctgcgtgggtctgatctcggatcaggactatgcc
gccgccgtcaaggatgccgaacgcttcctctcggggcgttctacccgggtgcaagaggag
ctggccgagcagatgatggccgcgtccgaggcgatggagttcgagcgtgcagcagccctg
cgcgaccggatccgggccttgaccacggtgcaaggcacccagggcatcaatccgcgcggc
gtggccgaggcggatgtggtggccttgcatctggaaaacgggcaggcctgtgtgcaggtc
ttcttcatccgggccaaccagaactggggtaaccgcgatttctatccccgcgtgggcgag
gatgtatcggcagccgaggtgatggaggcctttctcggtcagttctatgacaacaaggaa
ccgccccggcagctgatcctgtcggacgcgatcgagaatgccgacctgatgaccgaagcg
ctgagcgagaaggccgggcgcaaggtggaactgctggtgccccagcgtggtgaaaaggcc
gaactggtctcgggcgcgctgcgcaatgcgcgcgagtcgctggcccggcgcatgtccgaa
agcgccacccagaccaagctgttgggcggtctggccgaggctttcgatctggacgggccg
ccgcagcggatcgaggtttatgacaacagccatatccagggcaccaatgcagtcggcggc
atgatcgtggcggggcccgaagggttcctgaagaaccagtatcgcaagttcaacatccgg
ggcgacgacctgacccccggcgacgatttcggcatgatgaaagaggttctgacccgtcgg
tttacaaggctgctgaaagaggacccggaccgcgacaaggggctgtggcccgatctgttg
ctgatcgacggcggcgccgggcaggtcagtgcggtgcacgagatcatgatggcacacggg
gtccaggacattccgatggtcggggtggccaaaggcatcgaccgcgaccacggcaaggaa
gagttccaccgcaccggccagcgcccctttgccctgaaacgcaacgacccggtgctctat
ttcatccagcggctgcgggacgaggcgcaccgctttgccatcggcacccatcgcgccaag
cgggccaaggcggtcagcgcaaccccgctcgacgatattcccggcgtcggcgccgcccgc
aaacgcgcgctgctggcccatttcggcagcgccaaggcggtgagccgcgccgatctggcg
gacctgaccgcggtcgagggcgtgtctgcggggttggcgcagaagatctacgacttcttc
cacgaaagctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (7)   
   Pfam (7)   
All databases (32)   

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