KEGG   Sesamum indicum (sesame): 105166060
Entry
105166060         CDS       T04135                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 28
  KO
K13181  ATP-dependent RNA helicase DDX27 [EC:5.6.2.7]
Organism
sind  Sesamum indicum (sesame)
Brite
KEGG Orthology (KO) [BR:sind00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sind03041]
    105166060
   03009 Ribosome biogenesis [BR:sind03009]
    105166060
Spliceosome [BR:sind03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    105166060
Ribosome biogenesis [BR:sind03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    105166060
SSDB
Motif
Pfam: DEAD Helicase_C AAA_22 ARTD15_N
Other DBs
NCBI-GeneID: 105166060
NCBI-ProteinID: XP_011083581
UniProt: A0A6I9TQX1
Position
LG7:3088109..3096080
AA seq 746 aa
MATTTKFVFEPPSDEEIEHEEETESEDEDEEEAAAEDVEIKAEKVSKNKKSQSPWDFSSY
SESVADEHFRRSTTSIDDKISKARERRPILTAEDNDSDENSDSEPHHQEDYRPEEEDELP
TTSGNDVKSFFSHVEGVSFHANSFLDLHLSRPLLRACEALGYNKPTPIQAACIPLALTGR
DICGSAITGSGKTAAFSLPTLERLLYRPKNRPAIRVLILTPTRELAVQVHSMIGKLAQFM
TDIRCCLVVGGLSTKVQEAALRSLPDIVVATPGRMIDHLRNSLSVHLDELAVLILDEADR
LLELGFSAEIHELVKMCPKRRQTMLFSATMTEQVDELIKLSLNKPLRLSADPTTKRPATL
TEEVVRIRRMREGNHEAVLLALCSKTFTSKVIIFSGTKKAAHRLKILFGLAGLKAAELHG
DLTQAQRLDALELFRKQQVDFLIATDVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTA
RAGREGYAVTFVTDNDRSLLKAIVKRAGSRLKSRIVAEQSIKKWSEIIEQMEDQVSSILQ
EEREEMALRKAEMEVTKAENMIAHKDEIYSRPKRTWFVTEKEKKLVAKAAKEALGKLKSA
GNEVISAEQAEELKMKEKRRREREKNLPRKKRRKMEAAREMLEDEDEDEVKGERKSKTEK
KGIPLVDVAYRRAKAVKAAKKAVDAGKIVKKSVKKSKHPSQITKSRTEEMQELFQDDMSE
KRQKRTQRMGAKKKSSFKSKSRYKRR
NT seq 2241 nt   +upstreamnt  +downstreamnt
atggctacaaccacaaaattcgtgttcgaaccgccgagcgatgaggaaattgaacacgaa
gaggaaaccgaatctgaggatgaagatgaagaagaagcagcagcagaagatgtcgaaatt
aaagcagaaaaagtatcaaaaaacaagaaatcgcagtcgccgtgggacttctcctcctac
tccgagtcggtcgctgatgaacactttcggcggagcaccacttcaattgacgacaaaata
tccaaagctcgcgaacgacgccccatcctcaccgccgaagataatgactccgatgaaaat
tctgattcggagccccaccaccaagaggattatagaccggaagaggaggacgaattgcca
actactagtgggaatgatgtgaagtcattcttttcacatgtggagggtgtgtcgttccac
gcaaactcttttctcgacctgcatctttcgagaccgttgcttcgggcttgtgaagctttg
ggctataataagcccacccctattcaggctgcttgcataccattggctttaactgggcgt
gatatatgtgggagtgctattactggttccgggaagacagctgctttttctctaccaaca
ttggagagattgttataccggccaaagaataggccagctataagagttctaattctcact
ccaacaagggagttggctgttcaggttcatagtatgattggaaaacttgcacagtttatg
accgatatcaggtgctgtctggttgttggtggtctttcaacgaaggtgcaagaagcagca
ttgagatcactgccggatatagttgtggcgactccagggcgtatgatagatcacttacgc
aactctttgtcagtacatctggatgagcttgcagttttgatacttgatgaagctgatcgg
cttcttgagcttggatttagtgctgaaattcatgaactggtgaagatgtgtcctaaaagg
cggcagaccatgttattttcagcaaccatgactgagcaagtggatgagcttatcaagctc
tctctgaataaaccattgcgcttatcagctgatccaacaacaaagcggccagcaacatta
acggaagaggtggttcgtatacgtcgaatgcgtgaaggaaatcacgaagcagttcttctt
gcgttgtgctccaagacttttacatctaaagtgattattttcagtggaaccaagaaggct
gcgcatagattgaaaattttatttggtttagccggtcttaaagcagccgaacttcatgga
gacctcacccaggcccagcgtttggatgccttggaacttttcaggaagcaacaagtggat
ttcctaattgcgacggatgttgctgctcgtggtctcgatataattggtgttcagacagtt
attaattttgcatgtccgcgagatcttacgagttatgttcatcgggtgggccgcactgcc
agagcaggtagagaaggatatgctgtcacctttgttactgataatgatcggtctctacta
aaagctattgttaaaagagctggttctaggcttaaaagtcgaattgtagcggagcaatca
ataaagaaatggtctgaaataattgaacaaatggaagatcaagtgtcctcaattcttcaa
gaagaaagggaagaaatggctctgcgaaaagctgaaatggaggtgacaaaggcagaaaac
atgattgcgcacaaagatgaaatttattcacgccctaaaagaacttggttcgttacagag
aaggaaaaaaagcttgtagccaaggcagcaaaggaagctttggggaagctaaaaagtgct
ggcaatgaggtgatcagtgctgaacaagcggaagagttgaagatgaaggaaaagagaagg
cgagagcgcgagaaaaacttgcctaggaaaaaaagaaggaaaatggaggcggctagagaa
atgttagaggatgaggatgaggatgaagtcaagggagaaaggaaaagtaagacagagaaa
aaaggaattcctctggttgatgtggcataccgtagagcaaaagctgtgaaggctgcaaaa
aaggctgttgatgccggcaagatcgtgaaaaagtcggttaaaaagtccaagcacccttcc
caaataactaaatcaagaacagaagagatgcaggaacttttccaggatgacatgagtgag
aaaaggcagaaaagaacccaacgaatgggagcaaagaagaaatcctcattcaagagcaag
tcaaggtacaagcgccggtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (4)   
   Pfam (4)   
All databases (36)   

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