KEGG   Sesamum indicum (sesame): 105170649
Entry
105170649         CDS       T04135                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
sind  Sesamum indicum (sesame)
Pathway
sind03020  RNA polymerase
sind03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sind00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    105170649
  09124 Replication and repair
   03420 Nucleotide excision repair
    105170649
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sind03021]
    105170649
   03019 Messenger RNA biogenesis [BR:sind03019]
    105170649
   03400 DNA repair and recombination proteins [BR:sind03400]
    105170649
Transcription machinery [BR:sind03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     105170649
Messenger RNA biogenesis [BR:sind03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     105170649
DNA repair and recombination proteins [BR:sind03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      105170649
SSDB
Motif
Pfam: S1 SHS2_Rpb7-N Vg_Tdu
Other DBs
NCBI-GeneID: 105170649
NCBI-ProteinID: XP_011089805
UniProt: A0A6I9TW52
Position
LG9:4792412..4796251
AA seq 177 aa
MFFHIVLERNMQLHPRHFGRDLRDKLVAKLMKDVEGTCSGRHGFIVAITGIESVGKGLIR
DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
SGDIPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPGATS
NT seq 534 nt   +upstreamnt  +downstreamnt
atgtttttccacatcgtattggagcggaacatgcagctacaccctcgccacttcggccgt
gatctccgggataagctcgtcgccaagcttatgaaagatgttgagggcacttgcagtggt
cggcatgggttcattgtggcgattactggcattgagagtgttgggaaaggtttaattcgt
gatgggacggggtttgttacctttccggttaagtatcagtgcgttgtgtttcgacccttt
aagggagagatattagaagccgttgttacaatggttaacaagatggggttttttgctgaa
gcagggccagtccaaattttcgtatctaatcatctgataccagatgatatggagtttcaa
tctggagatattcccaactacacaacttcagatggatctgtcaaaattcagaaagacagt
gaagtcaggttgaagataattggaacccgagtagatgctacagaaattttttgcattggc
accataaaagatgactttctgggtgtgattagtgatccaggtgcaacctcttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (31)   

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