KEGG   Sesamum indicum (sesame): 105173661
Entry
105173661         CDS       T04135                                 
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A isoform X1
  KO
K07466  replication factor A1
Organism
sind  Sesamum indicum (sesame)
Pathway
sind03030  DNA replication
sind03420  Nucleotide excision repair
sind03430  Mismatch repair
sind03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sind00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    105173661
   03420 Nucleotide excision repair
    105173661
   03430 Mismatch repair
    105173661
   03440 Homologous recombination
    105173661
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:sind03000]
    105173661
   03032 DNA replication proteins [BR:sind03032]
    105173661
   03400 DNA repair and recombination proteins [BR:sind03400]
    105173661
Transcription factors [BR:sind03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    105173661
DNA replication proteins [BR:sind03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    105173661
DNA repair and recombination proteins [BR:sind03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     105173661
   MMR (mismatch excision repair)
     105173661
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     105173661
SSDB
Motif
Pfam: Rep_fac-A_C Rep-A_N REPA_OB_2 tRNA_anti-codon
Other DBs
NCBI-GeneID: 105173661
NCBI-ProteinID: XP_011093800
UniProt: A0A6I9U173
Position
LG11:complement(9029533..9033718)
AA seq 640 aa
MPVNLTANAISAINGGDVNSKPLVQVLDIKLIGSTQERYRLLLSDSVATQHAMLATQLND
RVKTGGVRKGSVIQLIDYICSTVQNRKIIVVLNMETIIPDCDVIGNPKMFSEADSVPQKP
APDMPSGRPTSIKNNNVGVQTSALASFSHVKTSGFQNQGSNTQSFRPTVQPSYQPPPNYK
NHGAIMRNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSD
GGEIRATCFNAVVDRFYDTIEVGKVYVISKGSLKPAQKNFNHLKNEWEIFLETASSVDLF
PDEDASIPRQQFSFRPISEIQHTESNSILDVIGVVVTVNPSVPILRKNGMETQRRILNLK
DQSGLSVELTLWGEFCNREGQQLQEMVETGNFPILAIKAGKVNDFTGKSVSTISATQLFI
NPDCSEANSLRDWFEHGGKEIASHSISREVMPGGSKNETRKTLAQIKDEGLGRSDKPDWI
TVKATISFIKTDNFCYTACPLMIGDRQCNKKVTKSGNSRWLCDRCNQEFEECDYRYLLQV
QVQDHTGLTWVTAFQETGEEILGCSAKDLYLLKYEAENDVKFTEIIRNCLFTEFLLRLKI
KEEIYGDEQRVKITVVKAEKVNYSEESRFLFDMIPKFQLR
NT seq 1923 nt   +upstreamnt  +downstreamnt
atgccggtgaatctgacggcgaacgccatatcggcgataaacggcggcgacgttaattcg
aagccactggtgcaggtgttggacatcaagctcattggctccacgcaggagcgctaccgc
ctcctcctctccgattccgtggcaactcagcacgccatgctcgccactcagctcaatgat
cgggtgaagaccggcggagtccgcaagggatcggtcatccagctcatcgattacatctgc
agcactgtccaaaaccgcaagatcattgtggtactaaacatggaaacaattattcctgac
tgtgatgtaattggcaacccaaaaatgttctccgaagctgattcagtgcctcaaaagcca
gcacctgatatgccttctggacgaccaacatcaataaaaaataataatgttggtgtgcaa
acttcagcactcgcaagctttagccatgtaaaaacttcaggtttccagaatcaaggcagc
aacactcagagtttccgtcccactgtacagccatcataccaacctcctccaaattataaa
aatcatggggcaatcatgaggaatgaggccccagcacggattatccctattgctgctctg
aatccttatcaaggtcgatgggccatcaaggcacgagtgacagcaaaaggagatcttcga
cggtacaacaatgcaagaggagatgggaaagtattctcctttgatctcctagactcagat
ggaggggaaatccgggcaacatgcttcaatgccgtagttgaccgtttttatgatactatt
gaagttgggaaagtctatgtgatatctaagggtagcttgaaacctgcccagaagaatttc
aaccatctgaagaatgagtgggaaatatttttggaaacggcatcatcagtggatcttttt
ccagatgaagatgcttcaataccaaggcaacagttttcatttagacctattagtgaaatt
caacataccgaaagcaattctatactggatgtaattggtgttgtagtaactgtaaatcct
tctgttcctatcttgagaaagaatggaatggaaacacaaaggagaattctgaacttgaag
gatcaatctgggcttagtgttgagctgacattatggggagaattttgcaacagggaagga
cagcagttgcaggaaatggtagaaactggtaactttcccattttagctatcaaagctgga
aaggttaatgacttcactgggaagtctgtcagtaccatctccgcgactcagttattcata
aatccagactgttccgaggctaacagcttaagagactggtttgagcacggtggaaaagag
attgcttctcattccatatctagagaagttatgcctggtggatcaaagaatgaaacacgc
aagactttggcacagataaaagatgaagggcttgggaggtccgacaagccggactggatc
acagttaaggcaaccatatctttcattaaaacagacaatttctgctacacagcttgcccg
ttgatgatcggtgacaggcagtgtaacaagaaagtgactaagtcagggaactctagatgg
ctatgtgataggtgtaatcaagaatttgaagagtgtgattacagatacctacttcaagtc
caggttcaggatcatactgggttgacatgggtgactgcttttcaggaaactggtgaagag
atattgggttgctcagccaaggacttatacctgttaaaatatgaagctgaaaatgatgtc
aaatttactgaaattattcggaattgtctttttacggagtttctccttaggcttaaaatc
aaagaggagatttatggtgatgaacagagggtgaaaatcacagttgtgaaggcagagaag
gtgaactattctgaagaaagtagatttctgtttgacatgatcccaaagtttcaattgcgt
tga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (42)   

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