KEGG   Sesamum indicum (sesame): 105178056
Entry
105178056         CDS       T04135                                 
Name
(RefSeq) DNA polymerase delta catalytic subunit
  KO
K02327  DNA polymerase delta subunit 1 [EC:2.7.7.7]
Organism
sind  Sesamum indicum (sesame)
Pathway
sind03030  DNA replication
sind03410  Base excision repair
sind03420  Nucleotide excision repair
sind03430  Mismatch repair
sind03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sind00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    105178056
   03410 Base excision repair
    105178056
   03420 Nucleotide excision repair
    105178056
   03430 Mismatch repair
    105178056
   03440 Homologous recombination
    105178056
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sind03032]
    105178056
   03400 DNA repair and recombination proteins [BR:sind03400]
    105178056
Enzymes [BR:sind01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     105178056
DNA replication proteins [BR:sind03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase delta complex
    105178056
DNA repair and recombination proteins [BR:sind03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase delta complex
      105178056
   MMR (mismatch excision repair)
    DNA polymerase delta complex
     105178056
SSDB
Motif
Pfam: DNA_pol_B DNA_pol_B_exo1 zf-C4pol DNA_pol_B_2
Other DBs
NCBI-GeneID: 105178056
NCBI-ProteinID: XP_011099704
UniProt: A0A6I9UKU1
Position
LG15:6307769..6327080
AA seq 1082 aa
MSATGNPRKRQQPPTPATPSPQLKHQAAMEEEELDEDVFLEETLLQYEEEDSQRRALADR
LAKWKRPALSPSLLSQSQNIVFQQLEIDYVIGDSHKEFLPSSSGPAAIIRIFGVTREGHS
VCSLVHGFEPYFYISCPPGMGPDDISHFHQILEGRMREANRNSKVPKFVRRIELVQRRSI
MYYQQQSSQPFLKIVVALPTMVTSCRGILDRGIQIDGLGMKSFMTYESNVLFALRFMIDC
NIVGGNWIEVPHGKYKKTARNLSYCQLEFDCLFSDLISHVPEGEFSKMAPFRILSFDIEC
AGRKGLFPEPTHDPVIQVANLVTLQGEDQPFVRNVMTLKSCAPIVGVDVMSFDTEKEVLL
AWRDFIREVDPDIIIGYNICKFDLPYLIQRAEVLGIAEFPILGRIRNSRVRVKDTTFSSR
QYGTRESKEVTVEGRLQFDLLQAMQREHKLSSYSLNSVSAHFLNEQKEDVHHSIISDLQN
GNSETRRRLAVYCLKDAYLPQRLLDKLMFVYNYVEMARVTGVPISFLLSRGQSIKVLSQL
LRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLC
YCTLVTPEDARKLNLPPECVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEA
KDPLEKAVLDGRQLALKISANSVYGFTGATIGQLPCLEISSSVTSYGRQMIEHTKKLVED
KFTVLGGYEHNAEVIYGDTDSVMVQFGVSSVEEAMNLGREAADYISGTFIKPIKLEFEKV
YYPYLLISKKRYAGLYWTNPKKFDKMDTKGIETVRRDNCLLVKNLVTECLNKILIERDIP
GAVQYVKNTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVELAERMRKRDAATAPNV
GDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDPHYYLENQISKPLLRIFEPILKNAS
KELLQGSHTRSISISTPSNSGIMKFAKKQLTCIGCKALISNSDHTLCSHCKGREAELYCK
SVANVSELEELFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEAKLQLDRW
NF
NT seq 3249 nt   +upstreamnt  +downstreamnt
atgagcgccaccggtaacccacggaaacgccagcaaccgccaacgccggcaactccatct
cctcaactgaagcatcaagcagcgatggaggaagaggagttagacgaggacgtattcctc
gaggaaaccctactccagtacgaggaggaagactcgcagcgccgtgccctcgccgaccgt
ctggccaagtggaagcgtccagcgctttccccttccctcttgtcccagtcccagaacatc
gtatttcaacagttggaaattgattatgttattggagatagccacaaggaatttcttcca
agctcttcaggtccggctgcaattattaggatttttggggtaaccagagaaggacatagt
gtttgctctcttgtacatggatttgagccatatttttacatcagctgccctccaggaatg
ggtcctgacgacatatcccatttccatcaaattcttgagggtaggatgagggaagcaaac
cggaatagtaaggttcccaaatttgttcgtcgcattgaactggttcaaagaagaagcata
atgtattatcaacagcagagttctcagccctttcttaaaattgtagtggcactgccaaca
atggttaccagctgtcgtggtatccttgatagaggaatacaaattgatggacttggcatg
aagagttttatgacctacgagagtaatgttctttttgctctccgtttcatgatcgattgc
aacatagttgggggcaattggattgaagttcctcatggaaaatataagaagacagcaaga
aatctctcctattgccagttagagttcgattgtcttttttcggacttgatcagtcatgtt
cctgaaggggaattctcgaagatggctccttttcgcatattaagctttgacattgagtgt
gctgggaggaaaggccttttccctgaacccactcatgatcctgttatccaggtggcgaat
ctagtgaccttgcagggagaagatcagccatttgttcgtaatgtgatgactcttaagtca
tgtgcacctattgttggtgttgatgtcatgtcatttgacacggagaaggaagttctatta
gcttggagggactttattcgtgaagtggacccagacattataattggttataacatctgc
aaatttgatttgccatatctcattcagagagctgaggtattggggatagctgaatttcca
atacttggacgcattcggaacagcagagtccgtgtcaaagatacaactttttcttccaga
caatatgggaccagggaaagtaaggaagttacagttgaggggagacttcaatttgatctg
ctacaggctatgcaaagggaacacaagttaagttcgtattcgctaaattctgtttctgca
cactttcttaacgagcagaaagaggatgtccatcattcaattatatctgaccttcagaat
gggaactcagaaacgaggaggcgtcttgctgtctattgtttaaaggatgcttaccttcca
caacgccttttggacaaattgatgttcgtttataactatgtggagatggctcgagtaact
ggcgttcccatctcgtttctactttcccgagggcagagtattaaggtgctgtctcagctt
ctgaggaaagcaaaacagaagaatctggttattccaaatgtgaaacaggctggatctgaa
cagggaacctatgagggtgcaactgttctggaagccagagcaggattctatgagaagcct
attgcgacactggattttgcatctttatatccatcaattatgatggcatacaacttgtgt
tattgtacactggtaactccagaagatgcgcggaaacttaatttgcctccagaatgtgtc
aacaaaactccatctggggaaacatttgtcaaatcaaatttacaaaagggaatactacca
gaaattcttgaagaacttttggctgctcgtaaaagggctaaagcagatttgaaggaagca
aaggatcctcttgagaaagccgtgttagatggtcggcaactggctttgaagataagtgca
aattctgtttatgggttcactggagctacaattggtcagttaccttgtttggagatatct
tcaagtgttaccagctatggtcgacaaatgattgaacacaccaaaaaacttgtggaagat
aaattcaccgtgcttgggggttatgagcacaatgctgaggtcatatatggagatacagat
tcagttatggtgcagtttggtgtgtcctcagtggaagaagccatgaacttgggtagggaa
gctgctgactacatcagcggcactttcatcaagcccataaagctagagtttgagaaggtt
tactatccatatcttctaattagtaagaagaggtatgctggtctttactggacaaaccca
aagaaatttgacaagatggacaccaaagggattgaaaccgttcgaagggataattgtttg
ctggtcaaaaacttggtgactgaatgccttaataaaatactgatagaaagagatatccct
ggtgctgttcagtatgtcaagaacacaatctcagatcttcttatgaatcgcatggactta
tcccttttagttatcaccaagggtctgacaaagacaggagatgactatgaagttaaagca
gcacatgttgagcttgcggaacggatgcgcaagcgggatgcggctactgctccaaatgtt
ggggatcgagtcccttacgtcattattaaagcagcaaaaggtgccaaggcttacgaaaga
tcagaggaccccatctacgtgttagagaacaacattcctatagaccctcattactacctc
gaaaatcaaattagcaagccattgcttaggatctttgaaccaatcttgaagaatgctagt
aaagagcttcttcaaggaagtcatacgagatctatttcaatttctaccccttcaaacagt
ggcatcatgaagttcgccaaaaagcaacttacttgcattggatgcaaggctttgattagt
aattcagatcatactctatgctcgcattgcaaaggaagagaagctgaactttattgcaag
tctgtagctaatgtttctgaattagaggagctgtttggtaggctatggacacaatgccag
gagtgccaaggctctcttcatcaggatgtgctgtgcactagccgagattgtccaatattt
taccggaggaaaaaagcacagaaagacatggcagaagccaagctacaattggatcgatgg
aacttctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (5)   
   KEGG PATHWAY (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (34)   
   KEGG ORTHOLOGY (1)   
   RefGene (30)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (4)   
   Pfam (4)   
All databases (56)   

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