KEGG   Sinorhizobium sp. CCBAU 05631: SS05631_c13460
Entry
SS05631_c13460    CDS       T05069                                 
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
sino  Sinorhizobium sp. CCBAU 05631
Pathway
sino03410  Base excision repair
sino03430  Mismatch repair
sino03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sino00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    SS05631_c13460
   03430 Mismatch repair
    SS05631_c13460
   03440 Homologous recombination
    SS05631_c13460
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sino03400]
    SS05631_c13460
DNA repair and recombination proteins [BR:sino03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     SS05631_c13460
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     SS05631_c13460
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      SS05631_c13460
SSDB
Motif
Pfam: DHHA1 RecJ_OB DHH
Other DBs
NCBI-ProteinID: ASY56290
UniProt: A0A249NRF2
Position
1295107..1296999
AA seq 630 aa
MPVAGRSAQPAGFSASKSSLERMNFGRTGSMDELADPIERAFLGVERSISGQRWVSRLDQ
AGQNRALAISQVHGYSELIARVLAGRGVGLDDAAQFLDPTLRALMPDPDALTDCRKAAER
LAGAIRRGEKVAIFGDYDVDGAASSALMLRFLRHFDVPAEIYIPDRIFEGYGPNPQAIEQ
LIGNGAGLIVAVDCGSTSHDSLAVAAERGIDVVVIDHHQVGAVLPPCHALVNPNREDDLS
GQGHLCAAGVVYLVLVNTLRVLRLEGNARAGSFDLLSLLDLVALATVCDVVPLKGLNRAY
VVKGLIAARHMVNSGLAALLRKAAIGGPVTPYHLGFLIGPRINAGGRIGDAALGSRLLTL
DDAAAAEVIASRLDELNRERQAMEAAMLAEAEAEVLAEYGTGEGASVIVTARENWHPGIV
GLIAARIKEKFRRPAFAIAFDPSGRGTGSGRSITGFDMGRLVRAAVDNGLLVKGGGHAMA
AGLTVERANLGRLRQFFEERAENPVRELVAVETLKVDGALAAAGATLDLVELLDQAGPYG
SAHPQPVFAFPQHRLRDSRQVGANHVKVTLEGHDGSRIDGIAFRATETPLGDFLLGNRGS
TVHVAGCVSSDLWQGTRRVQLRVTDAAKAS
NT seq 1893 nt   +upstreamnt  +downstreamnt
atgcctgttgcgggccggagcgcccagcctgccggtttttccgcctcgaaatcttcgtta
gaacgaatgaacttcggacggacaggcagcatggacgaattggcggatccgatagagcgg
gcatttctcggcgtcgaacgctcgatcagcggtcagcgctgggtctcgcgcctcgatcag
gccgggcagaaccgggcgctggcaatcagccaggtgcacggctattcggagctcatcgca
cgggtgctggccggccgtggcgtcggcttggatgatgcggcacaatttctcgatccgacg
ctgcgcgcgctgatgcccgatccggacgcactgaccgattgccgcaaggccgcggagcgg
ctcgccggcgccatccgccggggcgagaaggtcgcgatcttcggcgattacgatgtcgac
ggtgcggcatcctccgcactgatgctgcggttcctgcgccatttcgacgttccggccgaa
atctatattcccgatcgcatcttcgagggatacgggccgaacccgcaggcgatcgagcaa
ctgatcggtaacggggccggtctgatcgttgctgtcgactgcggttctacaagccatgat
tcgctcgccgtcgctgccgaacgcggcatcgacgtggtcgttatcgatcatcaccaggta
ggcgcggtgctgccgccgtgccacgcgctcgtcaatccgaatcgcgaggacgatttgtcc
gggcaggggcatctctgtgccgccggcgtggtctatctggtgctcgtcaatacgttgcgg
gtgctgcggcttgaggggaatgcgcgtgccggcagctttgatctgctgtcactcctcgac
ctcgttgcgctcgccacggtctgcgacgtggttccgctcaaggggctgaaccgcgcctat
gtcgtcaagggattgatcgcggcgcggcatatggtcaatagcggcctggcagcccttctg
cgcaaggctgcgatcggtggcccagtgacgccttatcatctgggcttcctcatcgggccc
cgcatcaatgcgggcgggcggatcggcgatgcggccctcggcagccggctcttgacgctg
gacgacgcggcggcggccgaagtgatcgccagccggctcgacgagctcaaccgcgagcgg
caggcgatggaggcggcaatgcttgcagaggccgaggccgaagtgctggcggaatacgga
acgggcgagggggcctcggtgatcgtcaccgcccgggaaaactggcaccctggcatcgtc
ggcctgatagcggcgcgcatcaaggagaagttccgccgcccggcctttgccatcgccttc
gacccgagcggccgcggaacgggttccggccgatcgatcaccggattcgacatgggcagg
ctcgttcgtgcggccgtcgacaatggcctcctcgtcaaagggggtggacatgccatggcc
gccggcctgacggtcgagcgcgccaatctcgggcgattgcgccagtttttcgaggaacgc
gccgagaacccggtgcgggaactggtcgcggttgagaccctcaaggtcgacggcgcactg
gcagcggccggagcgacgctcgacctcgtcgaacttctcgaccaggcgggcccttacggc
tcggcccatccgcaaccggtcttcgcctttccccagcaccgtctgcgcgacagccgccaa
gtcggcgccaaccacgtcaaggtcacgctcgagggccacgacggcagccgcatcgacggg
atcgccttccgggcaacggaaacgccgctcggcgatttcctgctcggcaatcggggctcg
acagtgcacgtcgctggttgcgtttcgtcggatctctggcagggaacgcggcgcgtgcaa
ctgcgtgtgacggacgcggctaaggcaagctga

DBGET integrated database retrieval system