KEGG   Streptococcus iniae ISET0901: DQ08_07765
Entry
DQ08_07765        CDS       T03285                                 
Name
(GenBank) DNA-directed RNA polymerase subunit omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
siq  Streptococcus iniae ISET0901
Pathway
siq03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:siq00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    DQ08_07765
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:siq03021]
    DQ08_07765
   03400 DNA repair and recombination proteins [BR:siq03400]
    DQ08_07765
Enzymes [BR:siq01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     DQ08_07765
Transcription machinery [BR:siq03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     DQ08_07765
DNA repair and recombination proteins [BR:siq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      DQ08_07765
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: AHY16341
Position
complement(1545918..1546235)
AA seq 105 aa
MMLKPSIDTLLDKVPSKYSLVILQAKRAHELEAGAKATQNFKSVKSTLQALEEIEAGNVV
IHPDPAAKRAAVRAKIEAERLAKEEEERKIKEQIAKEKEEEGEKI
NT seq 318 nt   +upstreamnt  +downstreamnt
atgatgttaaaaccttcaattgatactttattagataaagttccttcaaaatattcgctt
gtcatcctacaagcaaaacgtgctcacgaacttgaagctggagcaaaagcaacacaaaac
ttcaaatctgtgaaatcaactttacaagctctcgaagaaattgaagctggtaatgttgtt
attcatcctgacccagctgcaaaacgtgcagcagttcgtgctaaaattgaagcagaacgc
ttagcaaaagaagaagaagaacgcaagattaaagaacaaattgcaaaagaaaaagaagaa
gaaggagaaaaaatctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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