KEGG   Ruegeria sp. TM1040: TM1040_1006
Entry
TM1040_1006       CDS       T00359                                 
Name
(GenBank) aconitase
  KO
K01681  aconitate hydratase [EC:4.2.1.3]
Organism
sit  Ruegeria sp. TM1040
Pathway
sit00020  Citrate cycle (TCA cycle)
sit00630  Glyoxylate and dicarboxylate metabolism
sit01100  Metabolic pathways
sit01110  Biosynthesis of secondary metabolites
sit01120  Microbial metabolism in diverse environments
sit01200  Carbon metabolism
sit01210  2-Oxocarboxylic acid metabolism
sit01230  Biosynthesis of amino acids
Module
sit_M00009  Citrate cycle (TCA cycle, Krebs cycle)
sit_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:sit00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    TM1040_1006
   00630 Glyoxylate and dicarboxylate metabolism
    TM1040_1006
Enzymes [BR:sit01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.3  aconitate hydratase
     TM1040_1006
SSDB
Motif
Pfam: Aconitase Aconitase_C
Other DBs
NCBI-ProteinID: ABF63739
RoseoBase: TM1040_1006
UniProt: Q1GHX7
Position
complement(1075536..1078283)
AA seq 915 aa
MPITVGQDTAKTRKTLSVNGKSISYYSIPAATDAGYGDFTKLPAALKVVLENLLRFEDGG
FSVSTDDIKAFGDWAKNGGKNPREIAYRPARVLMQDFTGVPAVVDLAAMRDGIKTLGGDA
NKINPLVPVDLVIDHSVMIDEFGNPRAFQMNVDREYERNMERYQFLKWGQGAFNNFRVVP
PGTGICHQVNLEYLAQTVWSDVDQNGEEVAYPDTLVGTDSHTTMVNGAAVLGWGVGGIEA
EAAMLGQPISMLIPEVVGFELTGEMVEGTTGTDLVLKVVEMLRELGVVGKFVEFYGSGLD
NLPLADRATIANMAPEYGATCGFFPIDKETIRYLRNTGRDEDRIALVETYAKENGFWRDE
TYAPIYTETLSLDMGTIVPAISGPKRPQDYVALDGAAQAFKQVVSEYRGVDASANAAEMA
SEGPAPTAPVDPCKSHPVKGEDFALRDGSVVIASITSCTNTSNPYVMIGAGLVAKKAHEL
GLNRKPWVKTSLAPGSQVVSAYLEAAGLQEHLDAIGFNLVGYGCTTCIGNSGPIQKEFSE
AIAEGDLVATSVLSGNRNFEGRISPDVRANYLASPPLVVAYALAGDMNVDLARDPLGQDK
DGNDVYLKDIWPTQKEIADLVEATVTREAFQSKYADVFKGDEKWQSVETTEAETYDWPAA
STYIQNPPYFQGMGPEPGKIQDVIGAKPLLILGDMVTTDHISPAGSFATTTPAGKYLLDR
QVQPREFNSYGSRRGNHEIMMRGTFANIRIKNEMLDGVEGGYTKGPDGAQTSVYEASMAH
HEAGTPLVVFGGEQYGAGSSRDWAAKGTALLGVKAVIAESFERIHRSNLVGMGVIPFEFT
GGDTRKSLKLTGDETVDIRGLETVTPLQEVECDITYGDGSKKTITLKCRIDTAPEIEYIE
NGGVLHYVLRNLAKS
NT seq 2748 nt   +upstreamnt  +downstreamnt
atgcccatcaccgtcggacaggacacagccaaaacacgcaaaacattgagcgtgaacgga
aaatctatttcttattactccattccagccgcaacagacgccggatatggtgatttcacc
aaactgcctgcagccctgaaagtggtgcttgagaacctcttgaggtttgaagatggcggt
ttttcggtctcgaccgacgacatcaaggcgtttggcgactgggccaaaaacggcgggaag
aacccgcgcgagatcgcctatcgcccggcgcgcgtcctgatgcaggacttcaccggtgtg
cctgcggtggtcgatctggccgcgatgcgtgacgggatcaagacccttggcggggatgcc
aacaagatcaacccgctggtgcctgtcgatctggtgatcgaccactcggtgatgatcgac
gaatttggcaacccgcgcgcctttcagatgaatgtggaccgcgaatatgagcgcaatatg
gagcgctaccaattcctgaaatggggccaaggcgcgttcaacaacttccgcgtggtgcca
cccggcaccggcatctgccatcaggtgaaccttgaatatctggcccagaccgtctggtca
gatgttgaccaaaacggcgaggaagtggcgtatccggatacgcttgtgggcaccgacagc
cacaccaccatggtcaatggcgcggctgtgcttggctggggcgtgggcgggatcgaggcc
gaggccgcgatgctaggccagccgatctccatgctgatccccgaggttgtgggttttgaa
ctgaccggcgagatggttgaaggcaccaccggcacagaccttgtactcaaggtggtggag
atgctgcgcgagctcggcgtggtgggcaaattcgtggaattctatggctctggcctcgac
aacctgccgctggcggatcgtgccaccattgccaatatggcaccggaatatggcgccacc
tgcggctttttcccgatcgacaaggaaaccatccgctacctgcgcaacaccggccgcgac
gaggaccgcattgcgctggttgaaacctacgccaaggaaaacggtttctggcgcgatgag
acctacgcgccgatttacaccgagacactgagcctcgacatgggcaccatcgtgccggca
atctctggccccaaacgcccgcaggactatgtggcgctggacggcgcagcgcaggccttc
aaacaggtggtatcggagtatcgcggtgtggatgcgtcagccaacgcagccgagatggcg
tcagagggccctgccccgaccgcaccggtggatccgtgcaaatcgcaccccgtcaaaggc
gaagactttgcgttgcgcgacggctcggtggtgattgcctccatcacctcctgcaccaat
acctcaaacccctatgtgatgatcggggccggtctggtggcgaaaaaggcgcatgaactg
ggcctcaaccgcaaaccctgggtcaaaacctcgctggctccgggctctcaggtggtctcg
gcataccttgaggccgcaggcctgcaagagcatctggatgcgatcgggttcaacctcgtg
ggctatggctgcaccacctgtatcggcaactccggcccgatccagaaagagttctccgag
gcgattgccgagggcgatctggtcgccacctcggtgctgtcgggcaaccgcaactttgag
ggccgcatcagcccggatgtgcgcgccaactacctcgcctcgccgccgctggtggtcgcc
tatgcgttggcgggcgacatgaacgtggatctcgcacgcgatccgctcggccaggacaaa
gacggcaatgacgtctacctgaaggacatctggcccacccagaaggaaatcgccgatctg
gtcgaggccactgtgacccgcgaggcgtttcagtccaaatacgccgatgtcttcaagggt
gacgaaaaatggcaaagcgtggagaccactgaggccgagacgtacgactggcccgctgcc
tcgacgtatattcaaaacccgccctattttcagggcatgggcccagagccgggcaagatt
caggacgtcatcggcgccaagcctctgttgattctcggggatatggtcaccaccgaccat
atctctccggcggggtcttttgcgaccaccacaccggcgggcaaatacctgctggaccgt
caggtgcagccgcgcgagttcaactcttatggctcgcgtcgcggcaaccacgagatcatg
atgcgcggcaccttcgccaatatccgcatcaagaacgagatgctcgacggtgttgagggc
ggctataccaaaggtccagatggtgcgcagacctcggtctatgaggcgtcgatggcgcat
cacgaggctggcaccccgctggtggtgtttggcggcgaacaatatggcgccggatcctcg
cgtgactgggcggccaagggcaccgcgctcttgggggtgaaggccgttattgccgagagt
ttcgagcgtattcaccgctccaaccttgtgggcatgggcgtcatcccgttcgagttcacc
ggaggcgacacccgcaaatcgctcaagctcaccggcgatgaaacggttgacattcggggt
ctggagaccgtgacaccgctgcaggaggtcgagtgcgacatcacctatggcgacggcagc
aaaaagaccatcaccttgaagtgccgcatcgataccgcgccagagatcgaatacatcgag
aacggcggcgtgctgcactatgtgctgcgcaacctggccaagagctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (13)   
   KEGG PATHWAY (8)   
   KEGG MODULE (5)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
   ROSEOBASE (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (31)   

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