KEGG   Ruegeria sp. TM1040: TM1040_1093
Entry
TM1040_1093       CDS       T00359                                 
Name
(GenBank) Queuosine biosynthesis protein
  KO
K07568  S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
Organism
sit  Ruegeria sp. TM1040
Brite
KEGG Orthology (KO) [BR:sit00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sit03016]
    TM1040_1093
Enzymes [BR:sit01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.99  Transferring other glycosyl groups
    2.4.99.17  S-adenosylmethionine:tRNA ribosyltransferase-isomerase
     TM1040_1093
Transfer RNA biogenesis [BR:sit03016]
 Prokaryotic type
  tRNA modification factors
   Other tRNA modification factors
    TM1040_1093
SSDB
Motif
Pfam: Queuosine_synth DUF4350 DUF4131
Other DBs
NCBI-ProteinID: ABF63826
RoseoBase: TM1040_1093
UniProt: Q1GHP0
Position
1171133..1172182
AA seq 349 aa
MKLGDFDFDLPEELIATRPAVPRSSARLLVAEQDRISDGRVTDLLDWLAPGDRLVLNDTR
VIPARLSGQRHRNSAQGPVSARIEVTLLEPQADGSWAGLLKPLKKIKIGETLRFSDALSA
ELVDVVDGQGRLRFNLAGDDFDAALAEAGAMPLPPYIAAKRPADEQDKTDYQTVWARNSG
AVAAPTASLHFDEPLLKALSEKGVTFTYVTLHVGAGTFLPVKVEDVTTHKMHAEWGQVTP
EAAAEIAATKAAGNRVIPVGTTALRLIESAARESGAITPWEGETDIFIYPGFEFRVADAL
MTNFHLPKSTLMMLVSALMGQDRIRAIYAHAVKERYRFFSYGDASLLIP
NT seq 1050 nt   +upstreamnt  +downstreamnt
ttgaaactgggcgattttgattttgacctgccagaagagctgatcgcgacacgccctgcc
gtgccgcgctcttcggcgcgtcttctggtggcagagcaggaccggatttcggacgggcgc
gtcaccgaccttttggactggctggcaccgggggaccggctggtgctcaatgacacccgc
gtgatccctgcgcgtctcagcggtcagcgccaccgcaactcagcgcagggaccggtctcg
gcacgcatcgaggtaacgcttctggagccgcaggccgatggcagctgggcgggtctcctg
aagcccctgaaaaaaatcaagatcggcgagaccctgcggttctccgatgcgctttcggcc
gagcttgtcgatgtggtcgatggtcagggacggcttcggttcaacctcgcgggcgatgat
tttgacgcggcgctggcagaggcgggcgcgatgcccctgccgccctatatcgccgccaaa
cgccccgccgacgagcaggacaagactgactatcaaaccgtctgggcgcgcaattccggc
gcggtggcggcgcccaccgcgagccttcattttgacgagccgctcctgaaggcgctgtcc
gagaagggggtgacctttacctatgtgaccctgcatgtgggcgcgggcaccttcctgccc
gtgaaggtcgaggatgtgaccacccacaagatgcacgccgaatggggccaggtgacgccg
gaggccgccgccgagattgcagccaccaaggccgcaggcaatcgggtgatccccgtgggc
accacggcgctgcgcctgatcgaaagcgcggcacgcgaaagcggcgccatcacaccctgg
gaaggcgagacggacatttttatctatccgggtttcgagttccgggtggctgatgcgttg
atgacgaattttcatctgccaaaatcgaccctgatgatgctggtctctgccctgatgggg
caggatcgcatccgcgcgatctatgcgcatgcggtaaaggagcggtatcgcttcttttcc
tacggggatgcctcgctgctcattccctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
   ROSEOBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (3)   
   Pfam (3)   
All databases (20)   

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