KEGG T00359: TM1040

Ruegeria sp. TM1040: TM1040_1227

Entry

TM1040_1227       CDS       T00359

Name

(GenBank) Fmu (Sun)

K03500

16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]

Organism

sit Ruegeria sp. TM1040

Brite

KEGG Orthology (KO) [BR:sit00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sit03009]
    TM1040_1227
Enzymes [BR:sit01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.176  16S rRNA (cytosine967-C5)-methyltransferase
     TM1040_1227
Ribosome biogenesis [BR:sit03009]
Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    TM1040_1227

SSDB

Motif

Pfam:

Methyltr_RsmB-F FtsJ Methyltransf_31 Methyltransf_25 Methyltransf_23 MTS Methyltr_RsmF_N Methyltransf_15 Methyltransf_11 NSUN5_fdxn-like

Other DBs

NCBI-ProteinID:

ABF63960

RoseoBase:

TM1040_1227

UniProt:

Q1GHA6

Position

1320632..1321807

AA seq 391 aa
MTPGARVQAAIEILDEILAGQAVEKTLTNWARRSRFAGSKDRAAVRDHVYQALRCRRSYA
VLGGSETGRGLMLGACKDQGLDQAVLFHGEGHAPSPLSAAEQSIAPEFHSDAERHDIPEW
LWPVFSRSLGTEAIAAATALRSRAAVHLRVNLLKGDRDNAIKRLTREGIATEPHPASPTA
LTVTEGARRIKNAESYLQGFVELQDAASQAVVDKLPVQNAPRILDYCSGGGGKALAIAAQ
TQAEVYAHDADPRRMRDIPERAMRAGADIRCLTSEELVTQAPFDLVLCDAPCSGSGSWRR
DPEGKWRLTQDTLDDTVALQARILDEAAQRVAPGGVLAFATCSMLDVENSLQTQRFQERH
TGWAHLSETAWHVHSGTDGFYVSVFRRNGTE

NT seq 1176 nt +upstreamnt +downstreamnt
atgacaccgggtgcgcgcgtacaggcggctattgaaattctcgatgaaatcctcgcgggt
caggctgtggaaaagaccctgaccaactgggcgcggcgcagtcgatttgccggatcaaaa
gaccgcgccgcggtgcgcgatcacgtctatcaggcgcttcggtgccgccggtcctatgcg
gttctggggggaagtgagaccggacgggggctgatgcttggcgcttgcaaggatcaaggg
cttgatcaggcagtgctctttcacggtgaagggcatgcgccgtcccccctcagcgccgcc
gaacagagcatcgcgcccgaatttcacagcgacgcagagcgtcatgatatcccggagtgg
ctctggcccgtgttttcacgcagcctcggcactgaggcgattgcagcggcaaccgcgctc
aggtctcgagcggcagttcatctgcgggtgaacctcttgaaaggagatcgcgacaacgcc
atcaagcggctcacgcgggagggcattgccacagagccgcatccagcctcgccgaccgcc
ctgaccgtgacagagggggcgcgccgcataaaaaacgcagaaagctacctgcaaggcttt
gtggaattgcaggacgctgccagtcaggcagtcgtcgataagctgccagtgcaaaatgcc
ccgaggatattggactattgttccggcggtggaggcaaggctctggcgattgcagcacag
acccaggctgaggtctatgcgcatgatgcagacccacgacgcatgcgcgacattcccgaa
cgcgccatgcgggcgggggcggatattcgctgccttacctccgaggagcttgtaacgcag
gcgccgtttgacctcgtgctctgtgatgcgccctgcagtggtagcgggtcttggaggcgt
gatcccgagggtaagtggcgcctcacgcaggacactcttgatgacaccgtagcgctgcag
gcccgaattctggatgaagctgctcaacgcgtcgcgccggggggcgtcctggcctttgcg
acctgttcgatgctggatgtggaaaacagcctgcagacacagcgctttcaggagcggcac
accggctgggcgcacttgtctgaaacggcatggcatgtgcatagtggaacagacggattt
tacgtatcggtgtttcggcggaatggcacagaataa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
   ROSEOBASE (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (20)   

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