KEGG   Ruegeria sp. TM1040: TM1040_2145
Entry
TM1040_2145       CDS       T00359                                 
Name
(GenBank) sarcosine oxidase alpha subunit family
  KO
K22086  methylglutamate dehydrogenase subunit C [EC:1.5.99.5]
Organism
sit  Ruegeria sp. TM1040
Pathway
sit00680  Methane metabolism
sit01100  Metabolic pathways
sit01120  Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:sit00001]
 09100 Metabolism
  09102 Energy metabolism
   00680 Methane metabolism
    TM1040_2145
Enzymes [BR:sit01000]
 1. Oxidoreductases
  1.5  Acting on the CH-NH group of donors
   1.5.99  With unknown physiological acceptors
    1.5.99.5  methylglutamate dehydrogenase
     TM1040_2145
SSDB
Motif
Pfam: GCV_T SO_alpha_A3 Fer2_4 GCV_T_C FAD_oxidored Pyr_redox_2 HI0933_like FAD_binding_2 NAD_binding_8 FAD_binding_3 DAO GIDA Pyr_redox_3 AlaDh_PNT_C Thi4 Amino_oxidase YjcZ
Other DBs
NCBI-ProteinID: ABF64877
RoseoBase: TM1040_2145
UniProt: Q1GEN9
Position
complement(2250829..2253774)
AA seq 981 aa
MRVSGKGLLSGNRTVNFSFNGKAYMGLEGDTLASALLANDVHLVGRSFKYHRPRGILTAG
SEEPNALVSVGRGAARDPNIRATQQEIFEGLAAQSQNCWPSVERDVMAVNDLAAPFLGAG
FYYKTFMWPAPLWEKFYEPIIRRAAGLGALSGAANKDPYEKAFAFCDLLVIGSGPAGLMA
ALTAGRAGADVILAEDDSRMGGRLLAEIEEIDGKPAHVWVAEVLAELEAMENVRLMPRTA
VTGVYDQGTYSALERVSHHLPPSQSLKTAHRPRECFWRIAAKAAVLAAGAIERPIAFRNN
DRPGIMMAGAVRAYLNRWGVAPGERITVFANNDDAHRTARDLVAEGVHVTAVVDSRHDAP
DSGEFPVIKGAVICDSAGRQRLESVTIRSVNGEEKLQTDCLAVSGGWNPSVHLTCHMGAR
PEWNRELTAFLPKPDAVPGMVVAGAANGVFSTHGALRDGAEAAATALGKIGRSAAAVAVP
EASDAPYQISPLWAVPGKGRAWLDFQNDVTVKDVAQAARENFRSVEHMKRYTTQGMATDQ
GKNSNVAALAVLADATGRSIPETGVTTFRPPFVPTSIAAMGAGAEDQGFLPQRFLTSHKA
SLARGAANIEVGLWYRASYFAKDGESTWRQSCDREVTMVRNAVGVCDVSTLGKIDIQGPD
AAELLDLVYTNLFSTLKLGRVRYGLMLREDGFVMDDGTTARLGENHYVMTTTTAAAGQVM
AHLEYLTQVVRPDLDVRFTSVTDQWAQFSVAGPKARDLIDALVDEDVNGETFPFMACGVI
TVLGVAGRLFRISFSGEHAYEIAVPARYGEALYERLLERAEALGGGPYGMEALNVLRIEK
GFITHAEINGTVTAFDLGMQGLVSKNKSCWGKALSERDGLMHDDRMRLVGLKPVGAAQEM
SAGAHLFDPDATVERVNDLGYVTSVGFSPTLGHMIGLAMLSGGPDRMGDTIRLVDHTRGI
DTLCEVVNPVFFDPEGGRVRG
NT seq 2946 nt   +upstreamnt  +downstreamnt
atgagagtatctggcaaggggcttctgtccggcaaccggactgtgaatttttcctttaat
ggcaaggcctacatggggctggagggggacacgctggcctcggcgcttttggccaatgat
gtgcacttggtggggcggtcgttcaaataccaccgcccgcggggtatcctgacagcaggc
tccgaggagcccaacgcgctggtgagcgtgggacgcggggcagcgcgagatccaaatatc
cgcgccacccagcaggaaatttttgaggggctggcagcgcagagccagaactgctggcct
tcggtcgagcgcgatgtcatggcggtgaatgatctggcagcgcccttccttggggcgggg
ttttattacaagaccttcatgtggccagcgcccctgtgggagaagttctacgagccgatc
attcgccgggcggcggggcttggggccttgtccggggcggccaacaaggacccttacgag
aaggcctttgccttttgcgacctgctggtgatcgggtctggcccagccgggctgatggct
gcactgacggcagggcgtgcgggggcggatgtgatcctcgccgaggatgacagccggatg
ggcgggcgtcttctggcggagatcgaggagatcgacggcaagcccgcgcatgtctgggtg
gcagaggtgctggcggagctggaggccatggagaacgtgcgtctgatgccgcgcaccgcg
gtcaccggcgtctacgatcaagggacctattcggcgctcgagcgggtttcgcaccacctt
ccgccgagccagtccctgaagaccgcgcatcgcccgcgcgagtgtttctggcgcatcgcc
gccaaagccgcggtgctggcggcgggggctattgaacgccccattgcctttcgcaacaac
gaccgccccggcatcatgatggcgggggcggtgcgggcctatctcaatcgctggggagtt
gcgccgggcgagcggatcaccgtgtttgccaacaatgatgatgcccatcgcaccgcgcgg
gatctggtggcggagggcgtgcatgtcaccgccgttgtcgacagccgccatgacgcgccc
gacagtggcgaattccccgtcatcaagggcgcggtgatctgcgacagcgccgggcggcag
cggctggagagtgtcaccatccgcagcgtcaatggcgaggaaaagctgcaaaccgattgt
ctggccgtatctggcggctggaacccctcggtgcatctgacctgccacatgggcgcgcgc
ccggagtggaaccgggagctgacggcgttcctgcccaaaccggatgctgtgccgggtatg
gtggtcgcaggggctgccaatggggtgttttctacccatggtgcccttcgagacggggcc
gaggcggccgcgacggcattgggcaagatcgggaggtctgctgctgcggtggctgtcccc
gaggccagtgatgcgccttaccagatcagccctctgtgggcagtgccgggcaaagggcgg
gcgtggctggatttccagaacgacgtcaccgtgaaggatgtggcgcaggcagcgcgggag
aacttccgctcggtcgagcatatgaagcgttacaccacacagggcatggccaccgatcag
ggcaagaactccaacgtggcggccttggcggtgctggccgatgccaccgggcgcagcata
ccagagaccggtgtgacgacgttccgcccgccgttcgtgcctacctctatcgccgcaatg
ggggcaggggccgaagatcagggatttttgccgcagcggttcttgacctcgcacaaggca
tcgctggcgcgtggcgccgccaatatcgaggtcggactgtggtatcgcgccagctatttt
gccaaggacggcgagagcacctggcggcaatcctgcgaccgcgaggtcaccatggtgcgc
aatgccgtgggggtctgcgatgtctcgacccttggcaagatcgacattcagggaccagac
gcggcagagctgctggatctggtgtataccaatctgttctccacgctgaagctggggcgc
gtgcgctatggtctgatgctgcgcgaggacggctttgtcatggatgatggcaccaccgcg
cggctgggggaaaaccactatgtgatgaccaccaccaccgcggcggcggggcaggtgatg
gcgcatctggaatatctcacgcaggtggtgcgcccggaccttgatgtgcgcttcacgtct
gtgaccgatcaatgggcgcagttctcggtggctggccccaaggcgcgcgatctgatcgac
gcgctggtggatgaggacgtcaacggtgagaccttccccttcatggcctgcggggtgatc
accgtgctgggcgtggccgggcggctgttccggatatcgttttcgggcgagcacgcctat
gagatcgctgtgcccgcgcgctacggcgaggcactttatgagcggctgctggagcgggct
gaggcgctgggcggtggaccctacgggatggaagcgttgaatgtgctccggatcgaaaag
ggctttatcacccacgcggagatcaatggcacggtgacggcctttgaccttggtatgcag
gggcttgtgtcgaaaaacaaatcctgctggggcaaggccttgtccgaacgggatgggttg
atgcatgacgaccggatgcggcttgtgggcctcaagcccgtgggcgcggcacaagagatg
agcgcaggggcgcatctctttgatcccgacgccactgtcgagcgggtcaatgaccttggc
tatgtgacatcggtggggttctcaccgacgctggggcatatgatcgggctggcgatgctg
tcgggcgggccggacaggatgggcgacactatccgtctggtggatcacacccggggcatc
gacaccctgtgtgaagtggtgaaccctgtgttctttgaccctgagggagggcgcgttcgt
ggctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
   ROSEOBASE (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (17)   
   Pfam (17)   
All databases (36)   

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