KEGG   Ruegeria sp. TM1040: TM1040_2285
Entry
TM1040_2285       CDS       T00359                                 
Name
(GenBank) Cytochrome-c oxidase
  KO
K02298  cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3]
Organism
sit  Ruegeria sp. TM1040
Pathway
sit00190  Oxidative phosphorylation
sit01100  Metabolic pathways
Module
sit_M00417  Cytochrome o ubiquinol oxidase
Brite
KEGG Orthology (KO) [BR:sit00001]
 09100 Metabolism
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    TM1040_2285
Enzymes [BR:sit01000]
 7. Translocases
  7.1  Catalysing the translocation of protons
   7.1.1  Linked to oxidoreductase reactions
    7.1.1.3  ubiquinol oxidase (H+-transporting)
     TM1040_2285
SSDB
Motif
Pfam: COX1
Other DBs
NCBI-ProteinID: ABF65017
RoseoBase: TM1040_2285
UniProt: Q1GE99
Position
2404642..2406678
AA seq 678 aa
MATIPAATAAAQSSDALNQTHWFWGKLGWDIFPFYDPIIFGTFIGTCILAAGVVGIVLYY
RLLPYLWNEWFTTVDHKKIGIMYMILAVVMLVRGFADAVLMRLHQALASAGYVGFLPAYH
YDQVFTAHGVIMIFFVAMPFITGFMNYVMPLQIGARDVAFPFLNNFSFWLTVSGAVLIMI
SLFVGEFAATGWLAYAPLSGLKFSPGVGMDYYLWSLNIAGIGTTLSGINLVVTLVKMRAP
GMTWMKLPIFSWTTLCTNILIVVTFPVLTATLALLTADRYLGTHFFTNEMGGNPMMYVNL
IWIWGHPEVYILILPIFGIFSEIVATFCGKRLFGYASMVYATCVIMVLSYIVWLHHFFTM
GAGADVNSFFGITTMIISIPTGAKLFNWLFTMYKGRIRFELPMMWTIAFMLTFVVGGMTG
VLLAVPPADYVLHNSLFLIAHFHNVIIGGVVFGIFAGITYWWPKAFGFHLDPFWGKVSFW
GWVGGFWVAFMPLYLLGLMGVTRRLSQFEDTIYAGYFFTALIGALMIAVGLLAFLVQIFV
SIRNREKLAVGNDPWGGRTLEWSTTSPPPYYNFAFTPRVYERDAWHHMKTHDAKAPTSGF
VPIHMPHYTASGIILAGLMTVMGFALVWHIWWLSALMFLASLAYGIAHTFNYNRDYYVPA
EEVSEIETGQRTVATPAE
NT seq 2037 nt   +upstreamnt  +downstreamnt
atggctacgattcctgctgcaacagcagccgctcagtccagtgacgccctcaaccagacc
cattggttctggggcaagctcggctgggacatctttcccttctacgatccaatcatcttt
ggcacctttatcgggacctgtatccttgcggccggggtggtcggcatagtgctctactac
cgccttctgccctatctgtggaacgagtggttcaccacggtggaccacaagaaaatcggc
atcatgtacatgatccttgcggttgtgatgttggtgcgtggctttgccgatgcagtgctg
atgcggctgcatcaggcgctggcctcggcgggatatgtgggcttcttgcccgcttatcac
tacgatcaggtctttaccgcgcatggcgtgatcatgatcttcttcgtggcgatgcccttt
atcaccggcttcatgaactatgtgatgccgctacagatcggggcgcgcgacgtggccttt
ccgttcctcaacaacttcagcttctggctgacggtgtcgggtgcggtgctgatcatgatc
tcgctctttgtgggggagtttgccgcgaccggctggctggcctacgcgccgctttcgggc
ctgaagttcagccccggcgtcggcatggactactacttgtggtcgctcaacattgccggg
atcggcaccacgctctcgggcatcaacctcgttgtgaccctcgtcaagatgcgcgcaccg
ggcatgacctggatgaagctgccgattttcagctggaccacgctctgtaccaacatcttg
attgttgtgaccttcccggtcctcaccgcgaccctcgcgctgctgactgcggatcgctac
ctcggcacccatttctttaccaatgagatgggcggcaacccgatgatgtatgtgaacctg
atctggatctggggccacccggaggtctacatcctgatcctgccgatctttgggatcttt
tccgagatcgtcgcgaccttctgcggcaaacgcctctttggctatgcctccatggtctat
gcgacctgcgtcatcatggtcctgagctacatcgtctggctgcaccacttctttacgatg
ggggctggtgcggatgtgaactccttctttgggatcacaacgatgatcatctcgatcccc
acgggggccaagctcttcaactggctcttcaccatgtacaaggggcgtatccgctttgaa
cttccgatgatgtggaccatcgcctttatgctgacctttgtggtcgggggcatgaccggc
gtgcttctggcggtgccgcctgcggactacgtgctgcataactccttgttcctgattgca
catttccacaatgtgattatcgggggtgttgtgttcggcatctttgcgggcatcacctac
tggtggcccaaggcctttggcttccacctcgatcctttctggggcaaggtcagcttctgg
ggctgggtcggcgggttctgggtggccttcatgccgctctatctcctcggcctgatgggc
gtcacccgtcgtctgagccagtttgaagacaccatctatgcggggtatttctttaccgcc
ctcatcggcgcgctgatgatcgcggtcgggcttctggccttcctcgtgcagatcttcgtg
tcgatccgcaaccgcgagaaattggcggtgggcaatgatccttggggcgggcgcacgctg
gagtggtccaccacctcgccgccgccctattacaactttgccttcaccccgcgcgtctac
gagcgcgacgcctggcaccatatgaaaacccatgacgccaaggcgccgacctcgggcttc
gtaccgatccacatgccgcactacacggcaagcgggatcattctggcggggctgatgacg
gtaatgggctttgcactggtctggcacatctggtggctctcggcgctgatgttccttgca
agcctcgcctatgggatcgcccataccttcaactataaccgcgactattacgtgcccgcc
gaagaggtctctgaaatcgagaccgggcagagaacagtcgccacgcctgcggagtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (37)   
   KEGG ORTHOLOGY (1)   
   RefGene (33)   
   NCBI-PROTEINID (1)   
   OC (1)   
   ROSEOBASE (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (55)   

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