KEGG   Ruegeria sp. TM1040: TM1040_2775
Entry
TM1040_2775       CDS       T00359                                 
Name
(GenBank) dihydrolipoamide dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
sit  Ruegeria sp. TM1040
Pathway
sit00010  Glycolysis / Gluconeogenesis
sit00020  Citrate cycle (TCA cycle)
sit00260  Glycine, serine and threonine metabolism
sit00280  Valine, leucine and isoleucine degradation
sit00310  Lysine degradation
sit00380  Tryptophan metabolism
sit00620  Pyruvate metabolism
sit00630  Glyoxylate and dicarboxylate metabolism
sit00640  Propanoate metabolism
sit00785  Lipoic acid metabolism
sit01100  Metabolic pathways
sit01110  Biosynthesis of secondary metabolites
sit01120  Microbial metabolism in diverse environments
sit01200  Carbon metabolism
sit01210  2-Oxocarboxylic acid metabolism
sit01240  Biosynthesis of cofactors
Module
sit_M00009  Citrate cycle (TCA cycle, Krebs cycle)
sit_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sit_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
sit_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
sit_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:sit00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    TM1040_2775
   00020 Citrate cycle (TCA cycle)
    TM1040_2775
   00620 Pyruvate metabolism
    TM1040_2775
   00630 Glyoxylate and dicarboxylate metabolism
    TM1040_2775
   00640 Propanoate metabolism
    TM1040_2775
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    TM1040_2775
   00280 Valine, leucine and isoleucine degradation
    TM1040_2775
   00310 Lysine degradation
    TM1040_2775
   00380 Tryptophan metabolism
    TM1040_2775
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    TM1040_2775
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sit04147]
    TM1040_2775
Enzymes [BR:sit01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     TM1040_2775
Exosome [BR:sit04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   TM1040_2775
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox DAO Pyr_redox_3 FAD_binding_3 GIDA UDPG_MGDP_dh_N FAD_binding_2 NAD_binding_8 HI0933_like 3HCDH_N FAD_oxidored CIS_spike_tip
Other DBs
NCBI-ProteinID: ABF65507
RoseoBase: TM1040_2775
UniProt: Q1GCV9
Position
complement(2933253..2934611)
AA seq 452 aa
MTDIKRKVLVIGAGPGGYVCAIRAGQLGLDTVIVDEARPGGTCLNIGCIPSKAMIHAADE
FYKMTHAGAGPLGISAAGPTIDLEQTVAWKDGIVERLTGGVGGLLRKAGVKMISGRARFV
DGKTVTVAGDEGEIQIRADYIVIATGSAPVELPFLPFGGAVMSSTEALSLTEVPESLAVV
GGGYIGLELGTVFAKLGSKVTVVEAEDRILPLYDKALTRPVHKRLEELGVTVMTGTKAQS
HEGGALQTDAGEIAAERVLVTVGRRPRTQGIGIDELSLTMNGPFIRIDKVCQTSMRGIYA
IGDVTGEPMLAHRAMAQGEMVAEYLAGQAVEWDKRAIPAVCFTDPEIVTCGVLPGEVEGT
KSAEFPFVANGRAMTTERDEGFIRVVWREADNAVLGLQGVGVGISELSSAFSLAIEMGAC
LEDIAATIHAHPTQSEGLQEACLKALGHALHI
NT seq 1359 nt   +upstreamnt  +downstreamnt
atgactgatataaaacgcaaagttctggtgatcggcgctggccccggcggctatgtctgc
gccattcgcgctgggcagctcgggctcgatacggtcatcgtcgatgaggcccgccccggt
ggcacctgtctcaatatcggctgtattccgtccaaggcgatgatccatgccgccgacgag
ttctacaaaatgacccatgcaggcgcaggcccgcttgggatttcggccgcaggcccgact
attgatcttgagcaaaccgttgcgtggaaagatggcattgtagagcgcttgactggcggg
gtaggcgggctcttgcgtaaagcaggcgtcaagatgatctcaggccgcgcccgctttgtg
gatggcaagactgttaccgttgcaggcgacgagggcgagatacagatccgtgccgactac
atcgtgatcgcaaccgggtcggccccggtggaactgcccttcctgccatttgggggggcg
gtgatgtcttcgaccgaagcgctctccctgaccgaagtgcccgagagcctagccgtggtc
ggcggcggctatatcggcctcgaacttggcaccgtgtttgcaaaacttgggtccaaggtc
accgtggttgaggccgaggaccgtatactgccgctatatgacaaggcgctgacacgtcct
gttcacaaacgccttgaggagctcggcgtgacggtcatgacgggcaccaaagcgcagtca
catgagggcggcgcgctgcaaactgatgctggtgaaatcgctgcagagcgtgtgcttgtg
acggtcgggcgcaggccgcgcactcagggcattggtattgatgagttgtctctgacgatg
aacgggcctttcatccgcatcgacaaggtctgccagacctcgatgcgggggatctatgca
atcggggacgtgaccggagagcccatgcttgcccatcgtgcgatggcgcagggggagatg
gtggcggaatatctggccgggcaagcggtagagtgggacaagcgcgcgatccctgccgtg
tgttttaccgatccggagattgtcacctgtggcgtgctccccggcgaggtcgagggcacc
aaatcggccgagtttccgtttgtggccaatggtcgtgcgatgacaaccgaacgcgatgag
ggtttcattcgggtggtctggcgcgaagcggacaatgcggttctggggctgcagggtgtc
ggcgtgggcatatccgagctctcttcggcgttttcgctcgccatcgagatgggcgcctgc
cttgaggatatcgccgccaccatccatgcgcatccaacacagtccgagggtttgcaagag
gcctgtctgaaggcgcttggtcacgcgttgcacatctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (23)   
   KEGG PATHWAY (16)   
   KEGG MODULE (7)   
Chemical substance (27)   
   KEGG COMPOUND (27)   
Chemical reaction (11)   
   KEGG ENZYME (1)   
   KEGG REACTION (10)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
   ROSEOBASE (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (14)   
   Pfam (14)   
All databases (84)   

Download RDF
DBGET integrated database retrieval system