KEGG   Ruegeria sp. TM1040: TM1040_3165
Entry
TM1040_3165       CDS       T00359                                 
Name
(GenBank) Citryl-CoA lyase
  KO
K08691  malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25]
Organism
sit  Ruegeria sp. TM1040
Pathway
sit00630  Glyoxylate and dicarboxylate metabolism
sit00660  C5-Branched dibasic acid metabolism
sit00680  Methane metabolism
sit01100  Metabolic pathways
sit01120  Microbial metabolism in diverse environments
sit01200  Carbon metabolism
Module
sit_M00373  Ethylmalonyl pathway
Brite
KEGG Orthology (KO) [BR:sit00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    TM1040_3165
   00660 C5-Branched dibasic acid metabolism
    TM1040_3165
  09102 Energy metabolism
   00680 Methane metabolism
    TM1040_3165
Enzymes [BR:sit01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.3  Oxo-acid-lyases
    4.1.3.24  malyl-CoA lyase
     TM1040_3165
    4.1.3.25  (S)-citramalyl-CoA lyase
     TM1040_3165
SSDB
Motif
Pfam: HpcH_HpaI C-C_Bond_Lyase MIF4G_like
Other DBs
NCBI-ProteinID: ABF62139
RoseoBase: TM1040_3165
UniProt: Q1GMH7
Position
mega:complement(145368..146330)
AA seq 320 aa
MSFRPQPTPPARPNRCQLFGPGSNTKLFAKMAASAADVINLDLEDSVAPSDKDQARANVI
DAINTVDWGRKTLSVRINSLDTPYWYRDVVDLLEQAGDRLDQIMIPKVGCAEDVYAVDAL
VTAIERAKGRQKPISFEVIIESAAGIAHVEAIAASSPRLEAMSLGAADFAASMGMQTTGI
GGTQENYYMLHEGAKHWSDPWHWAQAAIVAACRTHGVLPVDGPFGDFSDDEGFMAQAKRS
ATLGMVGKWAIHPKQIALANEVFTPSDAAVAEAREILAAMEEAKATGAGATVYKGRLVDI
ASIKQAEVIVAQSDLIAQNS
NT seq 963 nt   +upstreamnt  +downstreamnt
atgagctttcgcccgcagcccacacccccggcccgccccaaccgctgccagctgtttggc
cccggctccaacacaaaactctttgccaagatggcagcgtcggctgcggatgtgatcaac
ctcgatctcgaagattccgtggccccgtcggacaaggatcaggcccgcgccaatgtgatc
gacgccatcaataccgtcgattgggggcgcaaaaccctgagcgtgcgcatcaacagtctc
gacacgccctattggtaccgcgatgtggtggaccttctggagcaggcgggtgatcggctc
gaccagatcatgatccccaaggtgggctgcgcagaggatgtctatgctgtcgacgcgctt
gtgaccgcgatcgaacgtgccaagggccgccagaagccgatcagctttgaagtcattatc
gaatctgcggcaggtatcgctcatgtcgaggccatcgccgccagcagcccgcgtctggag
gccatgagcctcggcgcggcggattttgccgcctccatgggcatgcagaccaccgggatc
ggcggcacacaggagaattactacatgctccatgagggcgccaaacattggtccgacccg
tggcactgggcccaggccgcaatcgtcgccgcctgccgcacccatggggtgctcccggtg
gacgggccttttggggacttctccgatgacgaagggttcatggcccaggcaaaacgctcc
gcgacgctgggcatggtgggcaaatgggcgatccaccccaagcagatcgcattggcgaat
gaggtctttacgccttcggatgctgccgttgccgaggcgcgcgaaatcctggctgcgatg
gaagaggccaaggccacaggcgccggcgcaaccgtctacaaagggcgtctggtcgacatt
gcgtccattaaacaggccgaagtcatcgtggcgcaatccgacctcatcgcacagaacagc
taa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (9)   
   KEGG PATHWAY (6)   
   KEGG MODULE (3)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (5)   
   KEGG ENZYME (2)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
   ROSEOBASE (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (32)   

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