KEGG   Ruegeria sp. TM1040: TM1040_3442
Entry
TM1040_3442       CDS       T00359                                 
Name
(GenBank) isopentenyl-diphosphate delta-isomerase
  KO
K01823  isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
Organism
sit  Ruegeria sp. TM1040
Pathway
sit00900  Terpenoid backbone biosynthesis
sit01100  Metabolic pathways
sit01110  Biosynthesis of secondary metabolites
Module
sit_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway
sit_M00364  C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:sit00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    TM1040_3442
Enzymes [BR:sit01000]
 5. Isomerases
  5.3  Intramolecular oxidoreductases
   5.3.3  Transposing C=C bonds
    5.3.3.2  isopentenyl-diphosphate Delta-isomerase
     TM1040_3442
SSDB
Motif
Pfam: NUDIX zf-HC2
Other DBs
NCBI-ProteinID: ABF62414
RoseoBase: TM1040_3442
UniProt: Q1GLQ2
Position
mega:complement(468295..468849)
AA seq 184 aa
MTERRPDLIPAWVDGTLTPVDKLRAHQEGMRHKAVSVFVVQGREILMQRRAMGKYHTPGL
WANTCCTHPQWREASDRCAVRRLREELGLEGLHPEYRHTLEYRADVGGGLIEHEVVDVYL
AHMLAPLGLAPNPAEVMETRWVDYHDLLAEVERHPDRFTPWLKIYLADYADVIFGPELIV
SAKP
NT seq 555 nt   +upstreamnt  +downstreamnt
atgacagagcgccgccccgatctgatccccgcatgggttgatggaaccctgacgcccgtg
gacaagctgcgcgcccatcaggaggggatgcgacataaggccgtgtccgtttttgtggta
caggggcgcgagatcctgatgcagcggcgcgcgatgggcaagtaccatacgcccggtctc
tgggcgaacacctgctgcacccatccgcagtggcgcgaggcgtcggatcgctgcgcggtg
cgtcggcttcgggaagagctgggcctggagggtctgcatcccgagtatcgccacacgctt
gagtatcgcgccgacgtgggcggcgggcttattgaacacgaagttgtcgatgtctacctt
gcccatatgctcgcaccgcttgggctggcgccaaatccggcagaggtgatggagactcgc
tgggtcgattatcatgacctcttggcggaggtggagcgccatccggatcggttcacgccc
tggctcaagatttatctggccgactatgcggatgtgatctttggccccgagctgatcgtc
tccgcaaagccctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (7)   
   KEGG PATHWAY (3)   
   KEGG MODULE (4)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
   ROSEOBASE (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (21)   

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