KEGG   Setaria italica (foxtail millet): 101755743
Entry
101755743         CDS       T02818                                 
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
sita  Setaria italica (foxtail millet)
Pathway
sita03013  Nucleocytoplasmic transport
sita03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sita00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101755743
  09122 Translation
   03013 Nucleocytoplasmic transport
    101755743
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sita03019]
    101755743
   03041 Spliceosome [BR:sita03041]
    101755743
Messenger RNA biogenesis [BR:sita03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     101755743
Spliceosome [BR:sita03041]
 Complex C
  Other components
   EJC/TREX
    101755743
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    101755743
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 NBCH_WD40 WD40_like Coatomer_WDAD DUF2121
Other DBs
NCBI-GeneID: 101755743
NCBI-ProteinID: XP_004956508
UniProt: K3ZV23
Position
II:25086973..25093755
AA seq 334 aa
MEGKEEERKGSGGAAAAAGGVSTPGANLKDLVSREYYGHKKKVHSVAWNCLGTKLASGSI
DHTARVWSIDPHGHSKVKDIELKGHTDSVDQLCWDPNHPDTVATAAADKSIRLWDARSGK
CQVIELSGENINITYKHDGTQIAVGNKEDELTILDVRSLKVVKKHKANYEVNEIAWNKAG
DLFFITTGLGHIEVVKDLEFLKPCKLNAHTAGCYCIAMDPLDRYFAVGSADSLVSLWNVK
ELLCIRTFTKLEWPVRTVSFNHTGEFIAYASEDPFIDIANVETGRSVHQIPCKAAMNSVE
WNPKYNLLAYAGDDKNKYQADEGVFRIFGFETHN
NT seq 1005 nt   +upstreamnt  +downstreamnt
atggagggcaaagaagaggagcggaagggcagcggtggcgccgccgccgccgccggcggc
gtctcgacccccggggcgaacctgaaggacctcgtttcgagggaatactacggccacaag
aagaaggtgcactctgtagcatggaactgcctaggcacaaagcttgcttcaggatcgatt
gatcatactgcacgtgtttggagcattgatcctcatggccattcgaaggttaaagatatt
gaactgaaaggccacacagatagtgtagatcagctatgctgggatccaaatcatcctgat
acagttgctactgcagctgctgacaagtctattcgtctttgggatgctcgaagtggaaaa
tgtcaagttattgaactgagtggagaaaacatcaacatcacatataaacatgatggtact
cagatagctgttggaaacaaggaggatgaactgacgattttggatgttcggtcattaaaa
gttgttaaaaaacacaaggctaattacgaggtgaatgagattgcatggaataaagctgga
gatctattcttcatcactactgggctaggacacattgaggtggttaaggatcttgagttt
ttgaagccctgcaaattgaatgctcatacagcagggtgttattgcattgcaatggatccc
cttgataggtacttcgctgttggaagtgcagattcacttgtcagtctttggaatgtcaaa
gagttgctatgcattagaaccttcacaaaacttgagtggccagtaagaacagttagcttc
aatcatactggagaattcattgcatatgccagtgaagatcctttcattgatattgcgaat
gttgagactggacgatctgttcatcagattccttgcaaagcagctatgaacagtgttgaa
tggaatcctaagtacaacctcctggcctatgcaggagatgacaaaaacaaataccaagct
gatgaaggtgttttccggatatttggctttgaaacacataactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (19)   

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