KEGG   Setaria italica (foxtail millet): 101761023
Entry
101761023         CDS       T02818                                 
Name
(RefSeq) ubiquitin-60S ribosomal protein L40-2
  KO
K02927  ubiquitin-large subunit ribosomal protein L40e
Organism
sita  Setaria italica (foxtail millet)
Pathway
sita03010  Ribosome
sita04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:sita00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    101761023
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    101761023
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:sita03011]
    101761023
   04121 Ubiquitin system [BR:sita04121]
    101761023
Ribosome [BR:sita03011]
 Ribosomal proteins
  Eukaryotes
   Large subunit
    101761023
  Archaea
    101761023
Ubiquitin system [BR:sita04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   101761023
SSDB
Motif
Pfam: ubiquitin Ribosomal_L40e Rad60-SLD Ubiquitin_2 Rad60-SLD_2 zf-C4pol TBK1_ULD Ubiquitin_5 Plexin_RBD Dsc3_N DUF2604 OTU1_UBXL
Other DBs
NCBI-GeneID: 101761023
NCBI-ProteinID: XP_004956212
UniProt: K3ZY23
Position
II:15469541..15471799
AA seq 129 aa
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGIIEPSLQALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQ
LRAKKKIKN
NT seq 390 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaagactctgacggggaagaccatcaccctcgaggtcgagagcagc
gacaccatcgacaatgtcaaggctaagatccaggacaaggaaggcatcccgccggaccag
cagcgcttgatcttcgccggaaagcagctggaggacggacgcacccttgctgattacaac
atccagaaagagtccaccctccacctcgtcctccgcctccgcggtggcatcattgaaccc
tctcttcaggcgctcgcccgcaagtacaaccaggataagatgatctgccgcaagtgctac
gcgcgccttcaccccagggctgttaactgccgcaagaagaagtgtggccacagcaaccag
ctgagggccaagaagaagatcaagaactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (12)   
   Pfam (12)   
All databases (25)   

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