KEGG   Setaria italica (foxtail millet): 101761584
Entry
101761584         CDS       T02818                                 
Name
(RefSeq) putative E3 ubiquitin-protein ligase RING1a
  KO
K10695  E3 ubiquitin-protein ligase RNF1/2 [EC:2.3.2.27]
Organism
sita  Setaria italica (foxtail millet)
Pathway
sita03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:sita00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    101761584
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sita04121]
    101761584
   03036 Chromosome and associated proteins [BR:sita03036]
    101761584
Enzymes [BR:sita01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     101761584
Ubiquitin system [BR:sita04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    101761584
Chromosome and associated proteins [BR:sita03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Canonical PRC1 (PRC1.2/1.4)
     101761584
    Noncanonical PRC1 (PRC1.1)
     101761584
    Noncanonical PRC1 (PRC1.3/1.5)
     101761584
    Noncanonical PRC1 (PRC1.6)
     101761584
SSDB
Motif
Pfam: zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-RING_UBOX zf-RING_5 zf-C3HC4_3 zf-C3HC4_4 zf-RING_4 zf-UDP zf-RING_6 zf-rbx1 TRAF3_RING zf-Nse zf-RING_10 zf-C3HC4_5 ZNF512_C2H2
Other DBs
NCBI-GeneID: 101761584
NCBI-ProteinID: XP_004961623
UniProt: K3Z5Q0
Position
III:complement(14491649..14496658)
AA seq 493 aa
MPAQKRPLPSSASPGPDAHVEDEAPAADADACGGGARRSPKLALNGPEERVGGPRQAKDR
RHDDSDADDEEEEGDGEGGAGGGGDDDCDSQSSQSDGEMDEFILVKLMDVRKEVQCPICL
GIIRKTRTVMECLHRFCRDCIDKSMRLGNNECPACRTHCASRRSLRDDPNYDSLILALYP
DIDKYEEEELAFSEQERTRNKKIQQSIAETFRRQTEALVKKRSAAKAPDAASTRKTRRNM
RSRRRGRTSSPDIVPTDFEDEDREENGNDGSKESSSVDDRSPEVRPKRARRWPVPRRSPA
KTIGSMDNGIEDNDDSGGARDLVTAAPLRGEMLAWGKNGTRSQTRHGNASGSSGRMAKGG
RVAKLVDQLRNADDFDSKLSLYLVLLPLDGQSVPKLEKPYLSCQPTLSVQHLCQFVALQL
SRQPKEVEIYIRKSSMDASLSANNTCKDEIKPDQSNGLERLWEEKSLSELYPSLTTCQGD
LELLYSLKAQGQV
NT seq 1482 nt   +upstreamnt  +downstreamnt
atgcccgcgcagaagcgcccgctcccgtcgtccgcctcgcccggccccgacgcccacgtc
gaggatgaagcccctgccgccgacgcggacgcctgcggcgggggcgcccgccggtcccca
aagctggcgctgaacggaccggaggagcgggtcggcgggccgcgccaggccaaggaccgg
cgccacgacgattccgacgctgacgacgaggaggaggaaggagacggcgaaggcggagcc
ggcggcgggggcgacgacgactgcgacagccagtcgtcgcagagcgacggcgagatggac
gagtttatacttgtgaaactaatggatgttcggaaggaagtgcaatgccctatatgctta
ggcattattcggaagacaaggacagtcatggagtgcttgcaccggttttgtagggactgc
atagataaatccatgcgacttggaaataatgaatgtccagcgtgccgcactcattgtgca
agcaggcgttccttgagggatgatcctaactatgactctttaattctggctttgtatcca
gatattgataagtatgaggaagaggaacttgctttcagcgaacaggaaagaacccgtaac
aaaaagattcaacaatccattgctgagacatttcggagacaaacagaagcacttgtgaag
aagcgctccgctgcaaaagcaccagatgcagcttctacaagaaagactcgacggaatatg
cggtcaaggaggagagggcgaactagttctcctgacattgtcccaactgattttgaagat
gaggatagagaagaaaatggtaatgatggaagcaaggagtcatcttctgttgatgaccgc
tccccagaagtaaggccgaaaagagctcggaggtggcccgtgccacggcgttcccctgct
aagactattggaagcatggacaatggcattgaggataatgacgactcaggaggtgctaga
gacttggtgactgctgctccgctgcgcggagagatgctcgcatgggggaaaaatggcacc
cgcagccaaacccggcatggcaatgccagtgggtccagtggaaggatggccaaaggtggc
cgtgttgccaagttggtggatcagctccgtaatgctgatgactttgatagtaagttgagc
ttgtatcttgtcctgcttccacttgatggacaaagtgtgcctaaactggaaaagccctac
ctcagttgtcagccaacactatctgttcagcatctctgccagtttgttgctcttcagctg
tctcggcaacccaaagaagttgagatatacattaggaaaagctccatggatgcatctttg
tcagccaataacacctgtaaagacgagataaagccggatcaatctaatggtttggaaaga
ttgtgggaagagaagtctctttcagagctgtacccttcgctcaccacctgtcaaggagat
ctggaattgctatactccctgaaagcacaaggacaagtgtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (16)   
   Pfam (16)   
All databases (30)   

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