KEGG   Setaria italica (foxtail millet): 101771512
Entry
101771512         CDS       T02818                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 12b
  KO
K03126  transcription initiation factor TFIID subunit 12
Organism
sita  Setaria italica (foxtail millet)
Pathway
sita03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:sita00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    101771512
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sita03021]
    101771512
   03036 Chromosome and associated proteins [BR:sita03036]
    101771512
Transcription machinery [BR:sita03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     101771512
   Coactivators
    SAGA/TFTC/STAGA complex
     101771512
Chromosome and associated proteins [BR:sita03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     101771512
    STAGA complex
     101771512
    TFTC complex
     101771512
    SAGA complex
     101771512
    SLIK complex
     101771512
SSDB
Motif
Pfam: TFIID_20kDa CBFD_NFYB_HMF
Other DBs
NCBI-GeneID: 101771512
NCBI-ProteinID: XP_004970563
UniProt: K3XG57
Position
V:complement(41341277..41345717)
AA seq 557 aa
MADPPPVAASASPAQPDQLTAAASVSTPQNPNPNPLLSPQIPPSPTVSDLSAHISSPQQL
DPAAAAASGGGGSMDYPPRPPQLQAPSPTQAGAGAGGFGQIHRSGSTSRLSTASQLPQYA
AMAARMYGAQMSFSGGGGLVGQQQQQQLAGRAPMLGQGQLGMLQGQGNAASAAHFGLQSQ
MMAQARQKGMVQGTQLNNANTAQVLQGMQPMGVMGTMGMSQMRPNGTIPYGAQQRFAHAQ
MRPQASQQAALSPQKVAGQGLSRTASITALNSQLPGSSQNGQMVAMSMPQQQQQQQWLKQ
MQSSMSSPVSPQQQFQHQQRLMLMQQLQQKTGLSQQQLAQVQQQHPHLNAQQLIQQQHFL
QQFQQQQQSLQSPRVSASGSQKSANHTGSQPGTPLSGGTMTGGSASQGAEGTSQLLGKRK
IQDLVAQIDPLGRLDPEVEDLLLEMADDFIDSVTAFACTLAKHRKSSVVEAKDVLLHLEQ
NWHLSVPGFSREDKNPQRNSVKPSVDPQQPESDAAGVRGPGNKLIANNSVGNHQIRPPIA
EPSAMPTMGPLSKAPRF
NT seq 1674 nt   +upstreamnt  +downstreamnt
atggcggatccgccgcccgtggccgcctccgcgtcgccggcgcagcccgaccagctcacc
gccgcggcctccgtctccaccccgcagaaccccaaccccaaccccctcctctccccccaa
atccccccgtccccgaccgtctccgacctctccgcgcacatctcgtccccgcagcagctc
gacccggcggccgcggccgcctcggggggcggaggatccatggactacccgccgcggccg
ccccagctgcaggcgccgtcgcccacgcaggcgggggccggcgctggggggttcggccag
atccaccgctcggggtcgacctcccgcctctccaccgccagccagctcccgcagtacgcc
gccatggcggctaggatgtacggcgctcagatgagcttctcgggcggcggaggactggtg
ggccagcagcaacagcagcagctggcggggcgtgcgcccatgcttgggcaggggcagctg
gggatgctgcaaggccagggaaacgcggcatccgcggcacattttgggctccagtcacag
atgatggcgcaggcaaggcaaaagggcatggtacaaggtacacaattgaataatgctaat
acagctcaagtgctgcaagggatgcagcccatgggagtcatgggtactatggggatgagt
cagatgagaccaaatggaactatcccctatggtgcccaacaacggtttgcccatgcacaa
atgagacctcaagcatctcaacaagctgcactatctcctcagaaagtagctggtcaaggc
ttgtcgagaacagcgtcaattacagcattaaattcacaactgcctggatcatcgcaaaat
ggacagatggtggcaatgtccatgcctcagcaacagcaacagcagcagtggttgaagcaa
atgcaatcatccatgagctcaccagtttctccacagcaacaatttcagcaccaacaaaga
ctcatgttaatgcagcaacttcagcagaaaacgggattgagccaacagcaacttgcacaa
gtccaacagcagcatccacatctcaatgcccaacaactgattcagcagcaacattttctc
cagcagtttcagcagcagcagcagtcactacaatctccaagggtttcagcgtctggttcg
cagaagtctgcgaaccatacaggatcacagccaggtacacctttgtccggtggaactatg
actggtggaagtgcaagccagggagctgaaggaactagccaacttcttgggaaaaggaag
atacaagatctggttgcacagatagatcccctaggcaggcttgaccctgaggtggaagat
ctacttttagaaatggctgatgacttcattgactcggtgactgcatttgcgtgcacctta
gcaaaacataggaaatcatcggttgtggaagcaaaggatgtgttgctgcacttagaacaa
aattggcatttgtctgttcctggattctcaagggaggataagaatcctcaaagaaactct
gtaaagccatcagtagatccgcaacaaccagaaagtgatgctgctggtgttagaggccca
ggcaataagcttattgctaataactcggttggcaaccatcaaataagacctccgattgcg
gagccttcagcaatgccaacaatgggacccctgtcgaaggctccccgcttttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (16)   

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