KEGG   Setaria italica (foxtail millet): 101777611
Entry
101777611         CDS       T02818                                 
Name
(RefSeq) histone deacetylase complex subunit SAP18
  KO
K14324  histone deacetylase complex subunit SAP18
Organism
sita  Setaria italica (foxtail millet)
Pathway
sita03013  Nucleocytoplasmic transport
sita03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:sita00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    101777611
   03015 mRNA surveillance pathway
    101777611
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sita03019]
    101777611
   03036 Chromosome and associated proteins [BR:sita03036]
    101777611
Messenger RNA biogenesis [BR:sita03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     101777611
Chromosome and associated proteins [BR:sita03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    Sin3A-HDAC complex
     101777611
SSDB
Motif
Pfam: SAP18 DUF6752
Other DBs
NCBI-GeneID: 101777611
NCBI-ProteinID: XP_004952079
UniProt: K3YWE4
Position
I:9374600..9378192
AA seq 152 aa
MAGMGDMPMRPARPGPPLQHRGPPPMARLRPEPIDREKTCPLLLRVFTRVAGHHQNEEFA
VRGKEPKDEVQIYTWKDATLRELTDLVKEVALPARKRNARLSFAFVYPDKNGRFVVRQVG
STFAYGHGRGDDAKTLAELGFQIGDYLSVAIM
NT seq 459 nt   +upstreamnt  +downstreamnt
atggcgggcatgggcgacatgcccatgaggccggcgcggccgggcccgccgctgcagcac
cgggggcctccgccgatggcgcgcctccgccctgaacccatcgaccgcgagaagacctgt
cctctcctgctcagggtctttacgagggttgctggccatcaccaaaatgaagagtttgct
gtcagagggaaagaaccaaaagatgaagttcaaatttatacatggaaggatgccacgctc
cgtgagctcactgatctcgtgaaagaggttgctcttccagcaaggaaaagaaacgctagg
ctttcttttgcatttgtgtacccagacaagaatggtcgttttgttgtaagacaggtgggt
tcaacattcgcatatggtcatggaagaggggatgatgccaaaactcttgcagagcttggt
ttccagattggtgattacttgagcgttgcgataatgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system