KEGG   Setaria italica (foxtail millet): 101778391
Entry
101778391         CDS       T02818                                 
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH14
  KO
K18663  activating signal cointegrator complex subunit 3 [EC:5.6.2.4]
Organism
sita  Setaria italica (foxtail millet)
Brite
KEGG Orthology (KO) [BR:sita00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sita03400]
    101778391
Enzymes [BR:sita01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     101778391
DNA repair and recombination proteins [BR:sita03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   Direct repair
    101778391
SSDB
Motif
Pfam: Sec63 DEAD ResIII Helicase_C AAA_22 T2SSE AAA_19 PhoH
Other DBs
NCBI-GeneID: 101778391
NCBI-ProteinID: XP_004985209
UniProt: K4A4P3
Position
IX:53016737..53035836
AA seq 2082 aa
MLAPLPRLTSALRGHYDADKAYLLRKTVLQALTLPRPHDEWELARKIVPGWDDASSEVRQ
AYKQFIGAVVELLNGEVVSEELHEVAQTVFALFGGDDTEYDAAQRAFVKRNELERLVGYT
VQDSVLRKLAQLAQKLGSLLRASSHEFIHRIADDVDENERREFGADFDFKPPARFVIDVS
LDIPLESAELGSETFLKGQYDGWSTSATRNSTAVRGSVSLRWLKDQCDLITRSGGSLSGD
ELAMTLCRVLISNKAGDEIAGELLDLAGDTAFEIVQDLLLHRKELVDAIQHGLAILKSEK
MTSSNQPKMPTYGTQVTVQTESERQLDKIRRKEEKRGKRGVDTGNSDIGVDDFSSLLLAS
ERKQPFDDMIGTGEGADSFTVTSLPQGTTRKHMKGYEEVKIPPTPTASLKPNEKLIEIRE
LDEFAQAAFQGYKSLNRVQSRIFQATYYTNENILVCAPTGAGKTNIAMIAVLHEVKQHFR
DGILHKNEFKIVYVAPMKALAAEVTATFSRRLSPLNLVVRELTGDMQLTKNEIEETQMIV
TTPEKWDVITRKSSDMSLSMLVKLIIIDEVHLLNDDRGSVIEALVARTLRQVESMQSMIR
IVGLSATLPTYLEVAQFLRVNPETGLFFFDSSYRPVPLAQQYIGISERDYTKKSELFNTL
CYEKVVESIKQGHQALVFVHTRKDTGKTARTLIDLAAKAGELELFSSADHPQFPLIKKDV
GKAKSREVVEFFESGFGIHNAGMIRSDRNLMERLFGDGLLKVLVCTATLAWGVNLPAHTV
VIKGTQLYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITTHDKLAYYLRLLTSQ
LPIESQFLGSLKDNLNAEVALGTVTNVREACAWLGYTYLFIRMKTNPLVYGITWEEVLGD
PSMGAKQRAFIIDAARALDKAKMMRYDEKSGNFYCTELGRIASHFYLQYSSVEIYNEMLR
RHMSESEVITMVAHSSEFENIVVREEEQDELEALARKACPLEIKGGPTDKHGKISILIQV
YISRAPIDSSSLHSDAQYISQSLARIMRALFEICLRRGWSEMSSLLLEYCKAVDRKIWPH
LHPLRQFDKDLSPQILWKLEERNVDLDRLYEMEENEIGALIRFSHQGKLVKQYVGYFPYV
NLSATVSPITRTVLKVDLHITPEFVWKDRYHGMSERWWIIVEDSENDTIYHSELFTLTKK
MARGIPSKISFNVPIFEPHPPQYYIRAISDSWLHAESLFTVSFHNLTLPQTQITHTELLD
LKPLPLSALGNKTYEDLYRFSHFNPIQTQSFHVLYHTDNNVLLGAPTGSGKTISAELAML
HLFNTQPDMKVVYIAPLKAIVRERMNDWRKRLVTQLGKKMVEMTGDFTPDLMALLSADII
ISTPEKWDGISRSWHSRSYVMKVGLMILDEIHLLGADRGPILEVIVSRMRYISSQTERSI
RFVGLSTALANARDLADWLGVTDDGLFNFKPSVRPVPLEVHIQGYPGKFYCPRMNSMNKP
AYAAICSHSPNKPVLIFVSSRRQTRLTALDIIQLAASDEKPRQFLSMADNSLDMVLSQVS
DSNLRHTLQFGIGLHHAGLNDRDRSLVEELFSNNKIQVLVCTSTLAWGVNLPAHLVIIKG
TEYYDGKTKRYIDYDITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLYEPFPVE
SNLREHLHDHINAEIVSGTISNKEEAIIYLTWTYLYRRLVVNPAYYGLEDTETNTLNSYL
SRLVETTFEDLEDSGCIRIDDHSVKYLILGKIASQYYLSYLTASMFGSNIGPNTSLEAFV
HILSAAAEFDELPVRHNEDNLNRTLSGNVPYPVDQHHLDDPHVKANLLFQAHFSRVELPI
SDYATDLKSVLDQSIRIIQAMIDVCANSGWLSSALSCMHLLQMIIQGLWFERDSSLWMLP
SMNDDILGHLRSRGVLTVPALLDLSREELHRLLQPFSASDLYQDLQHFPHVDVKLQLQNE
QERSKSRTLNIRVQLKNSRRSASRAFAPRFPKAKQAAWWLVLGNSTSSELYGLKRISFAD
WVVNTRMELPQMFNIQETKLILVSDSYLGFDQEYSLEHLTKC
NT seq 6249 nt   +upstreamnt  +downstreamnt
atgcttgcgccgcttccgcgcctaacgagcgcgctccgcggccactacgacgccgacaag
gcctacctcctccgcaagaccgtcctccaggccctcaccctccccaggccgcatgacgag
tgggagctcgcgcggaagatcgttcccggctgggacgacgcttctagcgaagtgcgccaa
gcatataagcagtttataggggcggtggtggagttgttgaatggagaagtagtgtctgaa
gaactccatgaagttgctcagaccgtgttcgccctgtttggtggcgatgacacagagtat
gatgccgcccaaagagcctttgtcaaaaggaatgaattggagaggcttgtgggctacact
gtacaagactcagttttaaggaagctagctcaattagctcagaagcttggttccctccta
cgggcaagctcccatgaatttatccacagaatagcagatgatgtagatgaaaatgagaga
cgtgaatttggagcagactttgatttcaagccacctgctcgtttcgttattgatgtttct
cttgacatacccttagaaagtgctgaattgggcagcgaaacatttctaaaagggcagtat
gatggttggagcacatctgcaactcgtaattcaactgctgttaggggttctgtgagtttg
aggtggctgaaagatcaatgcgatttgataactagaagtggtggctcactctcaggagat
gaacttgcaatgaccttgtgcagagtgctcatatcaaataaagcaggcgacgagatagct
ggtgagctgttggacctggctggtgacaccgcctttgaaatagttcaggatcttcttttg
cataggaaagagctagtagatgcaattcaacatggattggcaatattgaaatctgagaaa
atgacctcaagtaatcaaccaaagatgccaacttatggcacacaggtaactgtacaaaca
gagtctgagcgccaacttgataagattaggaggaaagaggaaaaacgtggcaaacgtggt
gtagacactggcaatagtgatattggtgttgatgatttctcatccctccttttggcaagt
gaaagaaagcagccttttgatgacatgattggtactggagaaggagcagatagttttaca
gtaacttcccttcctcaaggaaccacaaggaaacacatgaaggggtatgaagaagtgaag
attccaccaactccaacggcgtcactgaaacccaatgagaagctgattgaaataagagaa
ttagatgagttcgcccaagctgccttccagggatacaagtcactcaatcgcgtgcagagc
cgtattttccaagctacatactacaccaatgagaatatccttgtttgtgccccaacaggt
gctgggaaaacaaatattgcaatgattgcagttcttcatgaggttaaacaacacttcagg
gatggcattttacataaaaatgagtttaagatagtctatgttgctccaatgaaggccttg
gctgcagaggtaacagcgacattcagtcgccggttatctccattgaacctggtcgttaga
gaacttacaggagatatgcagttgacaaaaaatgagattgaagaaacacagatgatagtg
actactcctgagaagtgggatgtcattacacgcaaaagcagtgacatgtcgctttcaatg
ctggttaagctgataatcattgatgaagttcacctgctaaatgacgatagaggttcagta
attgaggcgctagtagctcggactctccgccaggttgagtccatgcaatcaatgattcgt
attgttggcctatctgctaccctacctacctacttagaggttgcacaatttttgcgggtt
aatccggagactggccttttcttttttgattcaagttaccgtccagttcctcttgctcag
caatacattgggatcagtgaaagggattacacgaagaaaagtgaactattcaatactttg
tgctatgagaaggttgtggagtccattaagcaaggtcaccaagcattggtttttgttcat
actcgtaaggatactgggaaaactgccagaaccctgattgacctagctgcaaaagcaggg
gaattggaattattttcaagcgcagatcatccccagtttccattaatcaagaaagatgtt
ggtaaagctaaaagtcgtgaagttgttgaattttttgaatctggatttggcatacacaat
gctggaatgatacgttctgacagaaatttgatggagcgcttgtttggtgacgggcttttg
aaagtccttgtttgtacagcaactttggcttggggagtaaacttaccagctcacacagtt
gttataaagggcacgcagctatatgatcctaaagctggtgggtggcgagatctggggatg
cttgatgtgatgcagatcttcggacgtgctggaaggccacagtttgataaaagtggtgaa
ggaattattatcacaacacatgacaaattggcttattacttaaggttattgacaagtcag
cttccaatagagagccagttccttggatctctgaaagataatttaaatgccgaggttgcc
ttgggcactgtaacaaatgtcagggaggcctgtgcctggcttggttatacgtacttattt
ataaggatgaagactaatcctctggtttatggaataacttgggaagaggttttgggagat
ccttctatgggtgcaaaacaaagagcattcattattgatgctgcacgtgcactagacaaa
gctaagatgatgcgctacgatgaaaagagtggcaacttttactgcacagaacttggtcga
attgcaagccacttttaccttcagtactccagtgttgagatttacaatgagatgcttcga
cgtcacatgagtgaaagtgaggtgattactatggtggcccattcctctgaatttgaaaat
attgtagtcagagaagaagaacaggatgaactagaagcccttgctaggaaagcgtgcccc
ttggaaattaagggtggaccgactgacaaacatgggaaaatttcaattctcatacaggtt
tatatttcccgtgctccaatcgatagctcctctttgcattctgatgctcaatacatcagt
caaagcttggctcgcattatgagggcactatttgagatttgtctgcgtcgtgggtggtct
gagatgtcatccttattattagaatactgcaaggccgtggatcgcaaaatatggccccat
ctccatccacttaggcagtttgataaggatctttctcctcagatattgtggaaactcgag
gaaagaaatgttgatctggatcgtctttatgagatggaggaaaatgaaattggagctctt
attcggttttctcaccagggaaagttggttaagcaatatgttggatacttcccatatgtc
aacttatctgcaactgtgagcccgatcaccaggacggttcttaaagtcgacctgcatata
acgcctgaatttgtgtggaaagatcgttatcatggcatgtcagaacgatggtggattatt
gttgaggattctgaaaatgataccatttatcactcagagctattcacactaacgaagaag
atggcaagaggaataccttcaaagatatcttttaatgtaccaatatttgaacctcatcca
ccacagtactatatacgagccatatcagactcatggttacatgctgagtcgctctttact
gtttcttttcataatctgacattgccacagacacaaattacgcacactgaacttttggac
ttgaagcctcttccactgagtgctcttggcaacaaaacatatgaggatctgtacagattt
tcccatttcaatccgatacaaactcagtcttttcatgttctttatcacactgataacaat
gtacttctgggagctccaactggaagtggcaagacaatttctgcagaactagcaatgctt
catcttttcaatacacaaccagacatgaaggtagtttacattgcccctttaaaggctata
gtgcgagaacgaatgaatgattggagaaaacgtcttgtaactcagcttgggaagaagatg
gttgagatgactggtgacttcactccagacctgatggccctattatcagctgacatcata
atttctaccccagaaaaatgggatgggattagtcgaagttggcatagcagaagttatgtt
atgaaggtggggctcatgatattggatgagatacatcttttgggagctgaccgtggaccc
atcctagaggtcattgtatcaagaatgagatacatatcgtcacaaactgaacgttcaatt
cggtttgtcggtttatcaacagcattagcaaatgcccgtgatttagctgattggttgggc
gttacggatgatggtctattcaatttcaagcctagtgtgaggcctgtacctcttgaagtg
catatccagggatatcctgggaaattctactgtccgagaatgaatagcatgaacaaacca
gcttatgcagccatatgctctcattcacccaataaaccggttctcatttttgtgtcatca
cgtcgacagactagacttacagctcttgatatcattcagcttgcagcatcagatgaaaaa
ccaaggcagttcctgagcatggcagacaattccctagacatggttctttcacaagtttct
gacagtaatttgaggcatactctgcagtttggcataggtctgcatcatgcaggtttaaat
gacagagacagatccttggttgaggaactcttttcaaacaataagattcaggtactggta
tgcaccagcacgttggcgtggggtgttaatcttccagctcacctggtcataatcaagggc
actgaatactatgatggcaaaacaaaaagatacatcgattatgatatcacagatattcta
caaatgatgggtcgtgcaggtcgaccgcaatacgaccaacatggcaaagctgttattctt
gtccatgagccaaaaaagagcttttacaagaagttcctctacgaaccatttcctgtggag
agtaatctgagggagcacttgcatgatcacataaatgcagaaattgtttcaggcaccatc
agcaacaaggaggaagcgattatttatctcacttggacttacctatatcgcagattggtt
gttaatccagcctactatgggttggaggatactgaaacaaacaccttgaattcttatctc
tcaaggttagtcgaaactacatttgaagatcttgaggacagtggatgcataagaattgat
gaccactctgtaaagtatttgattttgggaaaaatagcttcacagtattaccttagctac
ctcactgcttcaatgtttgggtcaaatattggccccaatacatcgctggaagcctttgtg
cacatactgtcggctgctgcagaatttgacgagcttcctgtacgccacaatgaggataac
ttgaatcgaacactcagtggaaatgtcccgtatccagttgatcaacaccaccttgatgat
ccacatgttaaagccaacttactctttcaggcacatttctcaagagtagaattaccaatt
agtgattacgccacggacttgaaatcagttcttgatcagagcatacgtattatacaggca
atgattgacgtatgtgccaatagtggatggctttcaagtgcgttgtcttgcatgcatctc
ttgcagatgatcatacagggtctctggtttgagagggattcatcactctggatgttgcca
tccatgaatgatgatattctaggtcatctcaggagtagaggagttttaacagtcccagcc
ttgctggatctttcccgtgaagaattgcacaggctccttcaaccattttctgcgtcagat
ttgtaccaggatctgcaacatttccctcatgttgatgtgaaacttcagcttcagaatgaa
caggagcggtccaaatctcgaactttaaacattagagtgcaattgaaaaattcacggcgt
tcagcatcaagagcatttgcccctagatttcccaaggcaaaacaagcagcttggtggctg
gtactggggaattctacaagttcagagctgtatggtttgaaaagaattagttttgcagat
tgggtggttaacactcgcatggaattgcctcagatgttcaatatccaggagacaaagctg
attttggtatcggattcctacctaggttttgaccaggagtactctcttgagcatctcacg
aagtgttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (20)   

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