KEGG   Setaria italica (foxtail millet): 101785219Help
Entry
101785219         CDS       T02818                                 

Definition
(RefSeq) probable mediator of RNA polymerase II transcription subunit 37c
  KO
K03283  heat shock 70kDa protein 1/2/6/8
Organism
sita  Setaria italica (foxtail millet)
Pathway
sita03040  Spliceosome
sita04141  Protein processing in endoplasmic reticulum
sita04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:sita00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101785219
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    101785219
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    101785219
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:sita01009]
    101785219
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sita03041]
    101785219
   03009 Ribosome biogenesis [BR:sita03009]
    101785219
   03110 Chaperones and folding catalysts [BR:sita03110]
    101785219
   04131 Membrane trafficking [BR:sita04131]
    101785219
   03051 Proteasome [BR:sita03051]
    101785219
   03029 Mitochondrial biogenesis [BR:sita03029]
    101785219
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sita04147]
    101785219
Protein phosphatases and associated proteins [BR:sita01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-5
    PP5-interacting proteins
     101785219
Spliceosome [BR:sita03041]
 Complex B
  Other components
   Prp19 complex
    101785219
 Complex C
   Prp19-CDC5 complex
    101785219
Ribosome biogenesis [BR:sita03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    101785219
Chaperones and folding catalysts [BR:sita03110]
 Heat shock proteins
  HSP70 / DNAK
   101785219
Membrane trafficking [BR:sita04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Other core components
    101785219
 Autophagy
  Chaperone mediated autophagy (CMA)
   Chaperones
    101785219
Proteasome [BR:sita03051]
 Eukaryotic proteasome
  Assembling factors
   Other assembling factors
    101785219
Mitochondrial biogenesis [BR:sita03029]
 Mitochondrial protein import machinery
  Endoplasmic reticulum membrane and cytosol
   Other ER-memrane and cytosol factors
    101785219
Exosome [BR:sita04147]
 Exosomal proteins
  Proteins found in most exosomes
   101785219
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: HSP70 MreB_Mbl FGGY_C Hydantoinase_A
Motif
Other DBs
NCBI-GeneID: 101785219
NCBI-ProteinID: XP_004961848
UniProt: K3Z4G6
Position
III
AA seq 649 aa AA seqDB search
MAKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ
VAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVVAGPADKPMIVVNYKGEEKQFSAE
EISSMVLTKMKEIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVISGLNVMRIINEPT
AAAIAYGLDKKATSSGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDN
RMVNHFVQEFKRKHKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYT
TITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFN
GKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIP
RNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQIT
VCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDEEHKKK
VDAKNALENYAYNMRNTIKDDKIASKLGADDKKRIEEAIDGAISWLDSNQLAEADEFEDK
MKELEGICNPIIAKMYQGAGADMGGAAGMDEDIPAGGSSGAGPKIEEVD
NT seq 1950 nt NT seq  +upstreamnt  +downstreamnt
atggcgaagggggagggtccggcgatcgggatcgacctggggacgacctactcgtgcgtc
ggcgtgtggcagcacgaccgcgtcgagatcatcgccaatgaccaggggaaccgcaccacg
ccgtcctacgtcgccttcaccgacaccgagcggctcatcggcgacgccgccaagaaccag
gtcgccatgaaccccaccaacaccgtcttcgacgcgaagcggttgatcggtaggaggttc
tctgacccgtccgtgcagagtgacatgaagctatggccgttcaaggtggtggctggccct
gcggacaagccgatgatcgtggtcaactacaagggggaggagaagcagttctctgctgag
gagatctcttctatggtgctgaccaagatgaaggagattgccgaggcctacctcggttcc
accatcaagaacgcggtggtcaccgtgcctgcctacttcaacgactcccagaggcaggcc
accaaggacgccggcgtcatctccggcctcaacgtgatgcgcataatcaacgagcccact
gccgcggccatcgcctacgggctcgacaagaaggccaccagcagcggcgagaagaacgtg
ctcatcttcgaccttggtggcggcacctttgatgtgtcgctgctgaccatcgaggagggc
atcttcgaggtgaaggccaccgccggcgacacccatctgggtggtgaggacttcgacaac
cgcatggtgaaccacttcgtccaggagttcaagcgcaagcacaagaaggacatcagcggc
aacccgcgcgcgctgcggcgcctgcggacggcctgcgagcgcgccaagcgcacgctatcg
tccacggcgcagaccaccatcgagatcgactcgctgtacgagggcatcgacttctacacc
accatcacccgcgcccggttcgaggagctgaacatggacctcttccgcaagtgcatggag
cccgtggagaagtgcctccgcgacgccaagatggacaagagcagcgtgcacgacgtcgtg
ctcgtgggcggctccacccgcatccccaaggtgcagcagctgctccaggacttcttcaac
ggcaaggagctgtgcaagagcatcaaccccgacgaggccgtggcgtacggcgctgccgtc
caggccgccatcctgagcggcgagggcaacgagaaggtgcaggacctgctcctgctcgac
gtcaccccgctgtccctcggcctggagaccgccggcggcgtcatgaccgtgctgatcccg
aggaacaccaccatccccacaaagaaggagcaggtcttctccacctactccgacaaccag
ccgggggtgttgatccaggtgtacgagggcgagcgcgccaggaccaaggacaacaacctc
ctgggcaagttcgagctctccggcatccctccggcgccccgcggcgtgccccagatcacg
gtctgcttcgacatcgacgccaacggcatcctgaacgtatcggcggaggacaagacgacg
gggcagaagaacaagatcaccatcaccaacgacaaggggcggctgagcaaggaggagatc
gagaagatggtgcaggaggcggaaaagtacaaggcggaggacgaggagcacaagaagaag
gtggacgccaagaacgccctggagaactacgcctacaacatgcgcaacaccatcaaggac
gacaagatcgcctccaagctgggcgccgacgacaagaagcgcatcgaggaggccatcgac
ggcgccatcagctggctggacagcaaccagctcgcggaggcggacgagttcgaggacaag
atgaaggagctggagggcatctgcaaccccatcatcgccaagatgtaccagggcgccggc
gcggacatgggcggcgcagcgggcatggacgaggacattccggccggcggcagcagcggc
gctggacccaagatcgaggaggtggactaa

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