KEGG   Setaria italica (foxtail millet): 101786097
Entry
101786097         CDS       T02818                                 
Name
(RefSeq) DNA repair protein RAD4 isoform X2
  KO
K10838  xeroderma pigmentosum group C-complementing protein
Organism
sita  Setaria italica (foxtail millet)
Pathway
sita03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sita00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    101786097
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sita03400]
    101786097
DNA repair and recombination proteins [BR:sita03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      101786097
SSDB
Motif
Pfam: BHD_3 Rad4 BHD_1 BHD_2 Transglut_core Aha1_N Glyco_hydro_95_C
Other DBs
NCBI-GeneID: 101786097
NCBI-ProteinID: XP_004973475
UniProt: A0A368RLV7
Position
VI:27248633..27254745
AA seq 863 aa
MRRTRSQSASEAKPALPSAGPGTEAATAGAGRRRASPAAKGKSPAKVETGSPLGNTRKKG
RAKAEPKDNASMERCSGGSRGKNNLEEQMEAVRDNDAVDMDWEEGHVEQNEYSHDLGETV
TVEFADDVPSSTSKKTVRRATAEEKELAELVHKVHLLCLIARGRVVDKACNDPLIQASIL
SLVPNHVLWSFTDVTNLRAVNLRNLVSWFHRTFCVTAQSTDRGSFVSNLAFTIQDRVGTA
EEVCALSVALFRALNLTARFVTNLDVAGLKPDTKVMGTLNQDASRLCTRSLPYSSPAADG
NVVSSPALLKDNTQDSVNMNQQRGGPGKSKQTSSCKRSLSKTLSSIKADNESSCISASSQ
LPSTSGNAEVPKRKGDVEFELQLEMALSATAAETQNNNQATHMSQSISSLQDSTPPMKKL
RQNTEATSTSSAVWSRSAGAPLYWAEVYCSGQASTGRWVHADVVNDLLDAERKVEASSAV
CKKPLRYAVAFAGNGAKDVTRRYCLQWHRIAQGRVNPEWWEDVLAPLKQMELTATNNSED
MELQTRALTEPLPTSQQAYKDHHLYALEKWLHKNQILHPKGPVLGFCKGHPVYPRSCVQT
LQSRHGWLREGLQIRENELPAKVVTRPKRAFNAQSVESSANEDALKPNLELYGEWQLEPL
QLPHAVDGIVPKNERGQVDVWSEKCLPPGTVHLRLPRLFQVAKRLGIDYAPAMVGFDYRS
GRCLPVFDGIVVCTEFKHAILEAYAEEEEKRRAEERKQEEAQALSRWYQLLCSIVTTQRL
KESYKTPSHGLGHEGPPRNDNNIQKNSYSSRRSEREPSSSKLQTDQDHEHVHEYPEEDQS
FDEETFVRTKRCPCGFSIQVEEL
NT seq 2592 nt   +upstreamnt  +downstreamnt
atgcggcggaccaggagccagtccgcgagcgaggcgaaaccggcgctgccctctgccggg
ccgggcacggaggccgcaaccgccggggcgggtcgccggagggcttcgccggcagcgaaa
gggaaatctcccgccaaggtggaaacaggatcaccacttgggaatacacggaaaaagggc
agagccaaggcagaaccaaaggataatgccagcatggagaggtgcagtggagggagccgc
ggaaagaacaatttggaggaacagatggaggctgttcgtgacaatgatgctgttgacatg
gactgggaagaggggcatgtagaacaaaatgagtattcccatgaccttggagagactgtc
actgttgagtttgctgatgatgtaccttcttccactagcaagaagactgttcggagggct
actgctgaagagaaggagttggctgaacttgtgcacaaggtccatttgctctgcctaata
gcaaggggtagggtggttgacaaggcttgcaatgatcctcttattcaggcctcgattctc
tctcttgtaccgaaccatgtattatggagttttactgatgttacaaacctgagagctgtt
aatctacgaaatcttgtgagctggttccatcgtactttttgtgtaaccgcacaatccact
gacaggggatcttttgtatcaaatttggctttcactattcaagatcgtgtaggcactgca
gaagaggtttgtgcactttcagtggcattgttcagggcacttaacttaacagcaaggttt
gttacgaatctggatgttgctggactaaagcctgatactaaagtgatgggaacactcaat
caagatgcatctaggctttgtacaaggtcactaccgtatagttctccagctgctgatggt
aatgtggttagttctcctgctctactgaaagataatactcaagatagtgtcaacatgaat
caacaaagaggaggtcctggaaaatcaaagcagacctcttcctgcaagagaagtttatct
aaaactttgtcaagcataaaagcagataatgaaagtagttgtatatcagccagcagccaa
cttccatccacttctggtaatgctgaagtgccaaaacgaaaaggggatgtggaattcgag
ttgcaactggaaatggctctttcagccacagctgctgaaacccaaaataataatcaagct
acccacatgagtcagtcaattagtagcttacaagattctaccccaccaatgaagaaattg
cgtcaaaatacagaagctacatccacctccagtgcagtttggtcaagaagtgctggagct
ccattatattgggctgaggtatactgcagtgggcaggcgtcaactggaagatgggtgcat
gctgatgttgtgaatgatctccttgatgctgaacgaaaagtagaagcttcttcagctgtt
tgcaagaagcctttaagatatgctgttgcttttgctggaaatggagccaaggatgtaaca
agaaggtattgcttgcaatggcacagaattgcacaggggagagtgaatccggagtggtgg
gaggatgttttggcaccactaaagcagatggaactgacagcaacgaacaattctgaagac
atggaacttcaaaccagagccctaacagaaccgcttcctaccagtcaacaggcctacaaa
gaccatcatctatatgctcttgagaagtggcttcacaagaaccaaattcttcaccccaaa
ggtccagttcttggcttctgcaaagggcatcctgtttatccaagatcctgtgttcaaaca
ctgcaatcaagacatggatggttgcgggagggccttcaaatccgagaaaatgagttgcct
gcaaaggttgttacacgtccaaagagggctttcaatgctcagtcagttgaatcaagtgct
aatgaagatgctcttaagccaaacttggaactatacggtgaatggcaactggaaccgctg
caacttcctcatgctgtagacggcattgtgccaaagaatgaacgaggccaagttgacgta
tggtcagagaagtgccttccacctggtacagtacacttgaggttaccaagattattccag
gttgcaaagagacttggcattgattatgctcctgccatggttggatttgattatcgaagt
ggtcggtgccttccagttttcgatggaattgttgtctgtaccgaatttaagcatgctatc
ctggaggcatatgcagaagaagaggagaagagacgagctgaggagaggaagcaggaggaa
gctcaggcactctccagatggtatcagctgctctgctccattgtaacaacacagagattg
aaggagtcatacaaaacaccttcacacgggcttggtcacgaagggccgcccagaaatgat
aataatatccagaaaaacagttacagcagtcgacgctcagaaagagagcctagttcaagc
aaactgcagacagatcaagaccatgagcatgtgcacgagtatccggaggaagaccagagc
ttcgacgaggagacctttgtgcggacgaaacgctgcccatgtggtttttcaatccaagta
gaggagctgtag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (7)   
   Pfam (7)   
All databases (20)   

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